ggKbase home page

PLM2_5_b1_sep16_scaffold_7390_3

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(1879..5001)

Top 3 Functional Annotations

Value Algorithm Source
cytochrome C peroxidase Tax=Bradyrhizobium elkanii RepID=UPI00036296D3 similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 1040.0
  • Bit_score: 1842
  • Evalue 0.0
Cytochrome C peroxidase {ECO:0000313|EMBL:KJC62679.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 1040.0
  • Bit_score: 1842
  • Evalue 0.0
cation efflux system protein similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 1040.0
  • Bit_score: 1799
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium sp. LTSPM299 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3123
ATGGATCGCCTCGTCGCCCTTGCCGTCAGCCGCCGCTATTTGATGGTGGGCTTGCTTGCCGTCGTGATGATCGGCGGCGTGATCGCATTCAAGCAGCTCAACATCGAAGCCTATCCCGACCCGACGCCGCCGATGGTCGATATCGTGACGCAAAGTCCGGGCCTGTCGTCGGAAGAGATCGAACGCTACATCACCATTCCGATCGAGACCCAGGTCGCGGGAATCAAGAACCTGCGCACGATCCGGACCATCTCGCTGTACGGATTGTCCGACGTCAAATTGCAGTTTTCGTTCGACTACACCTATGACGAGGCGCTGCAGCAGGTGTTGAACCGGCTGTCGCAACTGGCGCCGTTGCCCGGCAATGTGCAGCCGGGAATTTCGCCGCTCAGCCCGATCGGCGAAATCTACCGCTATCGATTGGCCGGACCTCCGAACTACAGCGCGCTCGATCTGAAGACGCTGCAGGACTGGGTCTTGCAGCGCCGCTTCCGCGCCGTGCCCGGCGTGATCGACGTCACCGGCTGGGGCGGCAAGACCAAGACCTATGAACTGCAGGTCGATTTCAACAAACTGATCGCCTACGGGTTGACGCTGCCGCAACTGCTGCAGGCGGTCGGCAACTCCAACATCAATGTCGGCGGCAATACCGTCAATATCGGCGCGCAATCCGCCGTGGTGCGCGGCGTCGGACTGATCCGGTCGATCGACGATCTGGCCAGCACCATGGTGTCGCAAAGCGGTGGCAATCCCGTGCTGGTCAAGGATATCGCGACCGTGACCATCGGCGAGAAGCCGCGGCTCGGCATCGCCGGGCTCGATCAGGACGACGACATCGTGCAGGGCATCGTGCTGATGCGCCGCGGCGAGCAAAGCTCGCCGACGATCCTGCGCGTCGAGCAGCTGGTAGCGTCGATCAACAATTCCAGCATCCTGCCGCCGGGCGTGCGGATCGAGCGCATCTATGACCGCAAGGATCTGATCGACATCACCACCGCGACAGTGTTGCACAATATGGTGGTCGGCATTCTTCTGATCGTGTTGCTGCAGTGGCTGTTTCTCGGCGACCTGCGCAGCGCGCTGATCGTCGGCGCGACGATTCCGTTCGCGCTGTTTTTCGCGGTGATTATCCTGGTGTTGCGCGGCGAATCCGCCAACCTGCTGTCGGTCGGCGCGATCGACTTTGGGCTGATCGTGGACGCCACCGTGATCATGGTGGAAGCGATTTTCCGCAGGCTGTCGCAAACCACGGCACTTTCGGAAGCCGAGCAGAGCCATATCTCCTACGACACCACCATGGGCATGAAGAGCCATGCCATCCTTTCGGCTGCCGCCGACGTGTCGCGGTCGATCTTCTTTGCCGCCGCCATCATCATCGCAGCCTTCCTGCCGCTGTTCACGCTCAGCGGCGTCGAAGGCAACATCTTCGGGCCGATGGCGCGGACCTATGCCTATGCGTTGGCGGGAGGTTTGCTCGCGACCTTCACTGTGACCCCTGCCTTGAGCGCGATCATCCTGCCGTCGCATATGCATGAAACCGAAACCTGGATCATGCGGCAGCTGAACCGGCTGTATATGCCGGTGCTGTACTGGGCGGTCCAGAACCGGAAACTGGTGATGGCGGGCGCCGCGGGCCTCGTGGTCATGACCATCATCTTCGGCCGGCTGCTCGGGCTGGAGTTTCTTCCCAAACTCGAGGAAGGCAATCTCTGGATCCGGGCGACCTTGCCGCCGACCATCTCGCTTCAGGAGGGCAACGCCTATGTCAACGAGATGCGAAAGATCATCCGCAGCCGCGCCGAGGTGGAATCGGTGGTGTCGCAGCATGGCCGTCCCGACGATGGCACCGATGCCGCCGGCCTGTTCAATGCCGAGTTCTTTGCGCCGCTAAAGCCGGTGAGCGAATGGCCCGATACCCACGACAAGAACGTCCTGACGGCTCAATTGCTGGCGCAACTGGAGGATAAATTCCCCGGCGTCGAATTCAATTTCTCGCAATATCTGCAGGACAACGTCTCTGAAGCGGTATCGGGAGTGAAGGGGGAGAACTCGATCAAGCTGTATGGCAACGATCTTCAGGCGCTGACCGACACCGCCAACAAGATCAAGTCCGTCCTTTCCACGGTACAAGGGGTCACCGATCTGGCGGTGTTCACCTCGCTCGGCCAGCCCACCGTCCAGATCGACATCGATCGCGCCAAGGCGGCCCGTTACGGGTTGGCTCCGGGGGACATCAACGCCACCATCAAGGTGGCGATCGGCGGCGACACCGCCGGCGATCTCTACGAGCCCGGCAGCGACCGGCATTTTCCGATCATCGTTCGTCTCGCCCCGGAGTATCGCAAGAGCGCCGAGGCGATCCAGAACTTGCGGATTGGCGCTGCGGGCCCGAACGGCACCATCACGCAGATCCCCTTGAGCGAAGTGGCGTCGATCAATGTGGTCTCGGGCGCCGCCTATATCTATCGGGAGCAGCAGGAGCGCTATCTGCCGATCAAATTCTCGGTGCGCGACCGCGACCTCGGCAGCGCGATCCGGGAAGCGCAGGACAAGGTCGCCGAGCAGGTCCAGCTGCCGCCGGGGTCGCGGGTCGAGTGGGTCGGCGAGTTCGGCAATCTGCAGGACGCCATCAAGCGGCTGTCGATCGTGGTGCCGATCAGCCTCGCGCTGATCGCGGTACTGCTGTGGTTCAATTTCGGCTCGATGGTCGACACGCTGCTCGCCATGAGCGTGATTCCGATGGCGATCTTCGGCGGCGTGCTTGGGCTGTTGATCTCGGGCATTCCGTTCAGCGTGTCGGCCGCGATCGGCTTCATCGCGCTGTTCGGCATCGCGGTGATGGACGGCATCATTATCCTGTCGCAGTACAACCAATTGATCGACGAAGGCTTCGACCGGGTCAGGGCGGTGATCCGCACCGGTGAGCTGCAGTTGCGGCCGGTGCTGATGACCTGCGTCGTCGCGGGCGCCGGGCTGTTGCCGGCGGCGATGTCGGCGGGGATCGGATCGCAGGTGCAAAAGCCGCTGGCGGTGGTGGTGGTCACCGGCATGATGCTGGCGCCGCTGGTGATCCTGGTGACCCTGCCGGTGCTGATCTCGTTCTTCTCGCGGCGGGCGCGGTGA
PROTEIN sequence
Length: 1041
MDRLVALAVSRRYLMVGLLAVVMIGGVIAFKQLNIEAYPDPTPPMVDIVTQSPGLSSEEIERYITIPIETQVAGIKNLRTIRTISLYGLSDVKLQFSFDYTYDEALQQVLNRLSQLAPLPGNVQPGISPLSPIGEIYRYRLAGPPNYSALDLKTLQDWVLQRRFRAVPGVIDVTGWGGKTKTYELQVDFNKLIAYGLTLPQLLQAVGNSNINVGGNTVNIGAQSAVVRGVGLIRSIDDLASTMVSQSGGNPVLVKDIATVTIGEKPRLGIAGLDQDDDIVQGIVLMRRGEQSSPTILRVEQLVASINNSSILPPGVRIERIYDRKDLIDITTATVLHNMVVGILLIVLLQWLFLGDLRSALIVGATIPFALFFAVIILVLRGESANLLSVGAIDFGLIVDATVIMVEAIFRRLSQTTALSEAEQSHISYDTTMGMKSHAILSAAADVSRSIFFAAAIIIAAFLPLFTLSGVEGNIFGPMARTYAYALAGGLLATFTVTPALSAIILPSHMHETETWIMRQLNRLYMPVLYWAVQNRKLVMAGAAGLVVMTIIFGRLLGLEFLPKLEEGNLWIRATLPPTISLQEGNAYVNEMRKIIRSRAEVESVVSQHGRPDDGTDAAGLFNAEFFAPLKPVSEWPDTHDKNVLTAQLLAQLEDKFPGVEFNFSQYLQDNVSEAVSGVKGENSIKLYGNDLQALTDTANKIKSVLSTVQGVTDLAVFTSLGQPTVQIDIDRAKAARYGLAPGDINATIKVAIGGDTAGDLYEPGSDRHFPIIVRLAPEYRKSAEAIQNLRIGAAGPNGTITQIPLSEVASINVVSGAAYIYREQQERYLPIKFSVRDRDLGSAIREAQDKVAEQVQLPPGSRVEWVGEFGNLQDAIKRLSIVVPISLALIAVLLWFNFGSMVDTLLAMSVIPMAIFGGVLGLLISGIPFSVSAAIGFIALFGIAVMDGIIILSQYNQLIDEGFDRVRAVIRTGELQLRPVLMTCVVAGAGLLPAAMSAGIGSQVQKPLAVVVVTGMMLAPLVILVTLPVLISFFSRRAR*