ggKbase home page

PLM2_5_b1_sep16_scaffold_7390_4

Organism: PLM2_5_b1_sep16_Alphaproteobacteria_Rhizobiales_62_16

near complete RP 44 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 9 / 38
Location: comp(5034..6278)

Top 3 Functional Annotations

Value Algorithm Source
hemolysin secretion protein D Tax=Afipia birgiae RepID=UPI0003195999 similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 396.0
  • Bit_score: 615
  • Evalue 3.40e-173
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKS41971.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 414.0
  • Bit_score: 613
  • Evalue 1.80e-172
HlyD family heavy metal efflux protein similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 401.0
  • Bit_score: 598
  • Evalue 9.50e-169

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1245
ATGCTGTTAGAATTTGCCAAGCAATTTCAGATGTTTAGCCGGCGACGCCTGGCTGTTGGCGCGGCTTTGCTGATTCTTGGCGCCGCCGCCTGGTATGGGTTTGCGCATATCGGCGGGACAACGCAGGGGCATTCCGAGGTGTCGAGCCAGTCCCGCAAAGGCTTGCAACGCTACAGCCCGAGCCCGGCCGAATGGGCCAGCCTGACCATCCAGCCCGTGACCGAGCGTGCTTTTCGGGCCGAGCATGTCACCGAGGGCAAGATCGCAGTTGATGAGGACCGCTCGACGCCGGTGTTTTCGCCCTATGCGGGCAGGGTCACCAAATTGCTGGCCCGGCCGGGCGACAGCGTCACGCAAGGCCAGCCGCTGTTCGTGATCGAGGCCGCCGATACCGTGCAGGCACAGAACGATTTCATCACGGCCGCGACCGGCCTGAACAAGGCCAGGTCGGCGCTCGATCTGGCGCAGTTGCAGCACAAACGCGCCAAGGATCTGTTCGAAGGCAAGGCCGTTCCGCTGAAGGATTTTCAGCAGGCCGAGGCAACCCTGATCCAGGCGCAGAACGATCTGCGCTCGACGGAAACGGCGCTGGAAGCCGCGCGCAACAAGCTGCGTATCCTCGGCCTGACCGACGACGCCATATCGGCATTTCAGGAGAAGGGCCGCATCAATCCGGAAACGACGATCTTTGCGCCGATCGCGGGCACGGTGGTCCAGCGCAAGATCGGTCCGGGCCAATATGTAAACTCCGGCGCCAGCGATCCGGTGTTTGTGATCGGCGATCTCTCCACCGTCTGGCTGACGGCCTTCGTGCGGGAGACCGAAGCCTCCACGGTGGTGGTGGGGCAGGAATTGACGTTCAACCTGCTGGCACTGCCCGGCCGCACGCTGACCGGGCGCATCAACTATGTCGCGGCGGCGATCGATCCCGCCACCCGCCGCCTGATGGTGCGCGCCACGGTGGACAATGCAAGCGGACAATTGAAGCCTGAAATGTTCGCCACCGTGACGCTCTACGCGCCCGACGATCAGCCTTCGGTTGGCGTTCCCAAACAGGCGCTGATCTACGAGGGAGACCAGGTCCGGGTCTGGGTCGCGCATGAGGACAAGTCGATCGAACTGCGTCAGATCAAGACCGGCCTCACCAATGGCGATCTCGTCGAGGTGCACGGCAATTTGAGGCCCGGCGAGCAGATCGTTACCAAGGGCAGCTTGTTCATCGACCGGGCCGCATCCGGCAGCTAA
PROTEIN sequence
Length: 415
MLLEFAKQFQMFSRRRLAVGAALLILGAAAWYGFAHIGGTTQGHSEVSSQSRKGLQRYSPSPAEWASLTIQPVTERAFRAEHVTEGKIAVDEDRSTPVFSPYAGRVTKLLARPGDSVTQGQPLFVIEAADTVQAQNDFITAATGLNKARSALDLAQLQHKRAKDLFEGKAVPLKDFQQAEATLIQAQNDLRSTETALEAARNKLRILGLTDDAISAFQEKGRINPETTIFAPIAGTVVQRKIGPGQYVNSGASDPVFVIGDLSTVWLTAFVRETEASTVVVGQELTFNLLALPGRTLTGRINYVAAAIDPATRRLMVRATVDNASGQLKPEMFATVTLYAPDDQPSVGVPKQALIYEGDQVRVWVAHEDKSIELRQIKTGLTNGDLVEVHGNLRPGEQIVTKGSLFIDRAASGS*