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PLM2_5_b1_sep16_scaffold_1241

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_1241_1
unknown

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comp(168..440)
DNA (273bp) protein (91aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_1241_2
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(568..903)
DNA (336bp) protein (112aa)
LBCA THIOREDOXIN Tax=synthetic construct RepID=UPI00038A5F74
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
thioredoxin
PLM2_5_b1_sep16_scaffold_1241_3
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(914..1627)
DNA (714bp) protein (238aa)
dolichyl-phosphate beta-D-mannosyltransferase (EC:2.4.1.83)
Dolichyl-phosphate beta-D-mannosyltransferase {ECO:0000313|EMBL:ABC82394.1}; EC=2.4.1.83 {ECO:0000313|EMBL:ABC82394.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
Glycosyl transferase family 2 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JE77_ANAD2
PLM2_5_b1_sep16_scaffold_1241_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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1628..3349
DNA (1722bp) protein (574aa)
PHP domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2V8_CONWI
PHP domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_1241_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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3358..4002
DNA (645bp) protein (215aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZY2_9CHLR
putative HAD-hydrolase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM2_5_b1_sep16_scaffold_1241_6
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3985..4539)
DNA (555bp) protein (185aa)
ADP-ribose pyrophosphatase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6P3W2_9FIRM
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:EKP95740.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
NUDIX hydrolase
PLM2_5_b1_sep16_scaffold_1241_7
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

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4563..5369
DNA (807bp) protein (269aa)
hypothetical protein bin=bin8_Chloro species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
integral membrane protein
Tax=CSP1_4_Chloroflexi
PLM2_5_b1_sep16_scaffold_1241_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5366..6073)
DNA (708bp) protein (236aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Trehalose-phosphatase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2V2_CONWI
trehalose-phosphatase
PLM2_5_b1_sep16_scaffold_1241_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6092..6433
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Patulibacter medicamentivorans RepID=H0E8X4_9ACTN
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_1241_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6433..6816
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=Actinomyces cardiffensis F0333 RepID=N6X0Y1_9ACTO
putative permease
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_1241_11
unknown

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6806..7210
DNA (405bp) protein (135aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_1241_12
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7256..8725
DNA (1470bp) protein (490aa)
metalloendopeptidase Tax=Desulfitobacterium sp. PCE1 RepID=UPI000369B8BD
metalloendopeptidase-like membrane protein
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:AFM00526.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
PLM2_5_b1_sep16_scaffold_1241_13
unknown

Not on your lists

comp(8817..9233)
DNA (417bp) protein (139aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_1241_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(9292..11703)
DNA (2412bp) protein (804aa)
ATP-dependent protease La (EC:3.4.21.53)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Lon protease Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FF86_CONWI
PLM2_5_b1_sep16_scaffold_1241_15
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11700..12137)
DNA (438bp) protein (146aa)
molecular chaperone Hsp20 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00034D6954
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:GAN51574.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
PLM2_5_b1_sep16_scaffold_1241_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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12256..14445
DNA (2190bp) protein (730aa)
Putative membrane protein mmpL3 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KY27_THERP
putative membrane protein mmpL3
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_1241_17
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

14456..15214
DNA (759bp) protein (253aa)
rfbA; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
dTDP-glucose pyrophosphorylase (EC:2.7.7.24)
Tax=CG_Arma_02
PLM2_5_b1_sep16_scaffold_1241_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

15216..15677
DNA (462bp) protein (154aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase Tax=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) RepID=A4YHT9_METS5
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_1241_19
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15794..16435
DNA (642bp) protein (214aa)
hypothetical protein Tax=Geobacillus caldoxylosilyticus RepID=UPI000301DEFD
dTDP-4-dehydrorhamnose reductase
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:AJY74595.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
PLM2_5_b1_sep16_scaffold_1241_20
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16432..16722)
DNA (291bp) protein (97aa)
dTDP-glucose 4,6-dehydratase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B5K9_FRADG
spore coat protein
Spore coat protein {ECO:0000313|EMBL:AJK54326.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
Displaying 20 items

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