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PLM2_5_b1_sep16_scaffold_1457

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_1457_1
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(41..502)
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H9Q0_ACTM4
Uncharacterized protein {ECO:0000313|EMBL:BAL89737.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM2_5_b1_sep16_scaffold_1457_2
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

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comp(502..834)
DNA (333bp) protein (111aa)
transcriptional regulator protein
Transcriptional regulator protein {ECO:0000313|EMBL:AIE85755.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
transcriptional regulator bin=RBG_19FT_COMBO_GAL15_69_19 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
PLM2_5_b1_sep16_scaffold_1457_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(861..1691)
DNA (831bp) protein (277aa)
Tyrosine recombinase XerC Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1B9_CONWI
integrase
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_1457_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(1725..3272)
DNA (1548bp) protein (516aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase (ATP) Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CLG2_DESK7
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM2_5_b1_sep16_scaffold_1457_5
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3406..3837
DNA (432bp) protein (144aa)
Putative uncharacterized protein Tax=Gordonia otitidis NBRC 100426 RepID=H5TFK1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWS99731.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_1457_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3743..5653)
DNA (1911bp) protein (637aa)
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysyl-tRNA synthetase {ECO:0000313|EMBL:ADB50937.1}; EC=6.1.1.6 {ECO:0000313|EMBL:ADB50937.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Lysyl-tRNA synthetase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8H3_CONWI
PLM2_5_b1_sep16_scaffold_1457_7
GWC2_Deltaproteobacteria_42_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5749..7437
DNA (1689bp) protein (563aa)
sdhA; succinate dehydrogenase/fumarate reductase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit Tax=Candidatus Nitrospira defluvii RepID=D8PA31_9BACT
Tax=GWC2_Deltaproteobacteria_42_11_curated
PLM2_5_b1_sep16_scaffold_1457_8
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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7437..8222
DNA (786bp) protein (262aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MKD4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJK56836.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
putative lipoprotein
PLM2_5_b1_sep16_scaffold_1457_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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8223..9302
DNA (1080bp) protein (360aa)
succinate dehydrogenase subunit B (EC:1.3.5.1)
Succinate dehydrogenase, Fe-S protein subunit Tax=Nitrospina gracilis 3/211 RepID=M1YNE9_9BACT
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_1457_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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9292..10188
DNA (897bp) protein (299aa)
CoB--CoM heterodisulfide reductase (EC:1.8.98.1)
CoB--CoM heterodisulfide reductase Tax=Sulfurihydrogenibium RepID=B2V7U6_SULSY
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_1457_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10190..10996
DNA (807bp) protein (269aa)
metallophosphoesterase Tax=Gemmata obscuriglobus RepID=UPI00016C5121
metallophosphoesterase
Putative phosphohydrolase {ECO:0000313|EMBL:CDD25250.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
PLM2_5_b1_sep16_scaffold_1457_12
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

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10996..11295
DNA (300bp) protein (100aa)
Uncharacterized protein Tax=Clostridium sp. CAG:253 RepID=R6LYM7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETP71864.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
PLM2_5_b1_sep16_scaffold_1457_13
unknown

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11292..11918
DNA (627bp) protein (209aa)
N-acetyltransferase GCN5
PLM2_5_b1_sep16_scaffold_1457_14
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11915..12388)
DNA (474bp) protein (158aa)
Type II secretion system protein E Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GE56_9FIRM
Type II secretion system protein E {ECO:0000313|EMBL:EEG78350.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
response regulator receiver protein
PLM2_5_b1_sep16_scaffold_1457_15
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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comp(12452..13375)
DNA (924bp) protein (308aa)
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase Tax=Mucispirillum schaedleri ASF457 RepID=V2QAQ4_9BACT
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
PLM2_5_b1_sep16_scaffold_1457_16
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(13368..14618)
DNA (1251bp) protein (417aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Aspartokinase Tax=Patulibacter medicamentivorans RepID=H0E6P5_9ACTN
aspartate kinase
PLM2_5_b1_sep16_scaffold_1457_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(14651..15241)
DNA (591bp) protein (197aa)
Recombination protein RecR Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=RECR_RUBXD
DNA replication and repair protein RecR
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_1457_18
unknown

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comp(15260..15448)
DNA (189bp) protein (63aa)

This feature has no annotations

Displaying 18 items

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