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PLM2_5_b1_sep16_scaffold_1964

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_1964_1
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..1619)
DNA (1617bp) protein (539aa)
3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase {ECO:0000313|EMBL:ABK17095.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ABK17095.1};; EC=4.2.1.17 {ECO:0000313|EMBL:ABK17095.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LI43_SYNFM
NAD-binding 3-hydroxyacyl-CoA dehydrogenase
PLM2_5_b1_sep16_scaffold_1964_2
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(1747..2937)
DNA (1191bp) protein (397aa)
acetyl-CoA acetyltransferase Tax=Streptomyces vitaminophilus RepID=UPI0003777789
putative fatty acid oxidation complex subunit beta
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_1964_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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3035..3715
DNA (681bp) protein (227aa)
MJ0042 family finger-like protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4L9_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_1964_4
GWB1_Spirochaetes_59_5_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(3712..4251)
DNA (540bp) protein (180aa)
hypothetical protein Tax=Streptomyces sp. CNS335 RepID=UPI00037E0A2A
hypothetical protein
Tax=GWB1_Spirochaetes_59_5_curated
PLM2_5_b1_sep16_scaffold_1964_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(4288..4980)
DNA (693bp) protein (231aa)
pgl; 6-phosphogluconolactonase (EC:3.1.1.31) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
6-phosphogluconolactonase
Tax=CSP1_6_Rokubacteria
PLM2_5_b1_sep16_scaffold_1964_6
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(4977..5780)
DNA (804bp) protein (268aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AW11_FRADG
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_1964_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(5805..6656)
DNA (852bp) protein (284aa)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B42FF5
3-methyladenine DNA glycosylase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_1964_8
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(6653..8014)
DNA (1362bp) protein (454aa)
Helix-turn-helix domain protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A931_THECD
Helix-turn-helix domain protein {ECO:0000313|EMBL:ACY98669.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
helix-turn-helix domain-containing protein
PLM2_5_b1_sep16_scaffold_1964_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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8307..8789
DNA (483bp) protein (161aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Pedosphaera parvula Ellin514 RepID=B9XHE4_9BACT
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EEF60779.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
glyoxalase
PLM2_5_b1_sep16_scaffold_1964_10
unknown

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8789..9019
DNA (231bp) protein (77aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_1964_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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9026..10861
DNA (1836bp) protein (612aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y3L6_THEBD
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_1964_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10858..11865
DNA (1008bp) protein (336aa)
2-oxoacid ferredoxin oxidoreductase subunit beta Tax=Streptomyces sp. LaPpAH-108 RepID=UPI000381835B
ferrodoxin oxidoreductase beta subunit
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_1964_13
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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11880..12716
DNA (837bp) protein (279aa)
hypothetical protein; K01259 proline iminopeptidase [EC:3.4.11.5] bin=bin9_gal15 species=Streptomyces prunicolor genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
peptidase S33, tricorn interacting factor 1
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM2_5_b1_sep16_scaffold_1964_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(12701..13450)
DNA (750bp) protein (250aa)
hypothetical protein Tax=Gemmata obscuriglobus RepID=UPI00016C52D1
putative sulfonate transporter
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_1964_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(13535..13753)
DNA (219bp) protein (73aa)
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 15 items

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