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PLM2_5_b1_sep16_scaffold_235

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_235_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3..440
DNA (438bp) protein (146aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_235_2
Pseudanabaena biceps, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

450..1019
DNA (570bp) protein (190aa)
Glutathione S-transferase domain protein Tax=Pseudanabaena biceps PCC 7429 RepID=L8N163_9CYAN
Glutathione S-transferase domain protein {ECO:0000313|EMBL:ELS33947.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena biceps PCC 7429.;"
gst2; hypothetical protein
PLM2_5_b1_sep16_scaffold_235_3
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1016..1801
DNA (786bp) protein (262aa)
thiosulfate sulfurtransferase (EC:2.8.1.1)
Thiosulfate sulfurtransferase, rhodanase Tax=sulfur-oxidizing symbionts RepID=G2D944_9GAMM
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (vent Ph05).;"
PLM2_5_b1_sep16_scaffold_235_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1845..2924)
DNA (1080bp) protein (360aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_235_5
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3032..4240)
DNA (1209bp) protein (403aa)
branched-chain amino acid ABC transporter substrate-binding protein Tax=Bradyrhizobium japonicum RepID=UPI000364392B
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETR76337.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
branched-chain amino acid ABC transporter substrate-binding protein
PLM2_5_b1_sep16_scaffold_235_6
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4237..5544)
DNA (1308bp) protein (436aa)
Putative uncharacterized protein Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SHN1_ACTS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV84289.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM2_5_b1_sep16_scaffold_235_7
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

5603..6499
DNA (897bp) protein (299aa)
glutamate racemase (EC:5.1.1.3)
Glutamate racemase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F311_CONWI
Tax=RBG_16_Actinobacteria_64_13_curated
PLM2_5_b1_sep16_scaffold_235_8
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6496..7203
DNA (708bp) protein (236aa)
RNAse PH (EC:2.7.7.56)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
Ribonuclease PH Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SWL1_SYNGF
PLM2_5_b1_sep16_scaffold_235_9
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

7190..7888
DNA (699bp) protein (233aa)
MgtC/SapB transporter Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARY4_RUBXD
MgtC/SapB transporter
MgtC/SapB transporter {ECO:0000313|EMBL:ABG05844.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM2_5_b1_sep16_scaffold_235_10
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists


8068..8448
DNA (381bp) protein (127aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI00036FA9A2
non-canonical purine ntp pyrophosphatase, rdgb/ham1 family
Tax=Caldatribacterium californiense
PLM2_5_b1_sep16_scaffold_235_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(8458..9285)
DNA (828bp) protein (276aa)
Ribonuclease BN Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2W0_CONWI
ribonuclease BN
Ribonuclease BN {ECO:0000313|EMBL:ADB54241.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_235_12
unknown

Not on your lists

9304..9720
DNA (417bp) protein (139aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_235_13
unknown

Not on your lists

9707..9916
DNA (210bp) protein (70aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_235_14
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

9916..10473
DNA (558bp) protein (186aa)
pyrE-1; orotate phosphoribosyltransferase (EC:2.4.2.10)
hypothetical protein Tax=Latescibacteria bacterium SCGC AAA252-D10 RepID=UPI00038129AF
Tax=RBG_16_Actinobacteria_64_13_curated
PLM2_5_b1_sep16_scaffold_235_15
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

10545..10874
DNA (330bp) protein (110aa)
DNA-binding protein HU Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PEA6_9FIRM
histone family protein DNA-binding protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
PLM2_5_b1_sep16_scaffold_235_16
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

10960..11877
DNA (918bp) protein (306aa)
Orotidine 5'-phosphate decarboxylase Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SS02_PLAL2
orotidine 5'-phosphate decarboxylase
Tax=RBG_16_Actinobacteria_64_13_curated
PLM2_5_b1_sep16_scaffold_235_17
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

11881..12201
DNA (321bp) protein (107aa)
Peptidoglycan-binding LysM Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LGD6_THEPS
peptidoglycan-binding LysM
Peptidoglycan-binding LysM {ECO:0000313|EMBL:AFV11040.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetogenium.;" source="Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB).;"
PLM2_5_b1_sep16_scaffold_235_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12275..13342
DNA (1068bp) protein (356aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B525FB
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_235_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13330..14295
DNA (966bp) protein (322aa)
1-phosphofructokinase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F319_CONWI
1-phosphofructokinase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_235_20
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

14341..15822
DNA (1482bp) protein (494aa)
Uncharacterized protein Tax=Ilumatobacter coccineus YM16-304 RepID=M5AKU8_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN01975.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
PLM2_5_b1_sep16_scaffold_235_21
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15941..17098
DNA (1158bp) protein (386aa)
IMP dehydrogenase family protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F320_CONWI
IMP dehydrogenase family protein
IMP dehydrogenase family protein {ECO:0000313|EMBL:ADB50300.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_235_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

17098..18675
DNA (1578bp) protein (526aa)
GMP synthase [glutamine-hydrolyzing] Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F321_CONWI
GMP synthase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_235_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(18676..19698)
DNA (1023bp) protein (341aa)
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B33E00
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_235_24
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

19724..20272
DNA (549bp) protein (183aa)
Uncharacterized protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SN88_METPP
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_235_25
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


20269..20703
DNA (435bp) protein (145aa)
50S ribosomal protein L13 Tax=Patulibacter medicamentivorans RepID=H0E0G3_9ACTN
50S ribosomal protein L13
Tax=RBG_16_Actinobacteria_64_13_curated
PLM2_5_b1_sep16_scaffold_235_26
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20700..21095
DNA (396bp) protein (132aa)
30S ribosomal protein S9 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJI7_SYNLT
30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).;"
PLM2_5_b1_sep16_scaffold_235_27
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21100..22365
DNA (1266bp) protein (422aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q0H7_9FIRM
PLM2_5_b1_sep16_scaffold_235_28
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

22430..24259
DNA (1830bp) protein (610aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8I1_CONWI
glucosamine/fructose-6-phosphate aminotransferase
PLM2_5_b1_sep16_scaffold_235_29
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

24285..25529
DNA (1245bp) protein (415aa)
membrane protein Tax=Curtobacterium ginsengisoli RepID=UPI0003B5ABB2
Permease {ECO:0000313|EMBL:EFH83486.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
integral membrane protein
PLM2_5_b1_sep16_scaffold_235_30
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25492..26592)
DNA (1101bp) protein (367aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI000373092A
Bacterial membrane flanked domain protein {ECO:0000313|EMBL:KJL19240.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
Displaying items 1-30 of 37 in total

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