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PLM2_5_b1_sep16_scaffold_335

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_335_1
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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3..194
DNA (192bp) protein (64aa)
Antibiotic transport system ATP-binding protein Tax=Amycolatopsis orientalis HCCB10007 RepID=R4TH49_AMYOR
drrA: daunorubicin resistance ABC transporter, ATP-binding protein
DrrA: daunorubicin resistance ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AHY47397.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM2_5_b1_sep16_scaffold_335_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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191..967
DNA (777bp) protein (259aa)
Putative multidrug ABC transporter permease protein Tax=Ilumatobacter coccineus YM16-304 RepID=M5A3S0_9ACTN
ABC-2 type transporter
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_335_3
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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964..1731
DNA (768bp) protein (256aa)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B5DB69
ABC-type multidrug transport system permease component
ABC-type multidrug transport system permease component {ECO:0000313|EMBL:AHY47395.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM2_5_b1_sep16_scaffold_335_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1966..5910
DNA (3945bp) protein (1315aa)
PAS sensor protein (EC:2.7.13.3)
PAS sensor protein Tax=Chloroflexus RepID=A9WJE8_CHLAA
Tax=GWA2_Rokubacteria_73_35_curated
PLM2_5_b1_sep16_scaffold_335_5
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5963..6406
DNA (444bp) protein (148aa)
Two component transcriptional regulator, winged helix family Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DK54_9FIRM
OmpR; response regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEF95141.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 /; CO-1-SRB).;"
PLM2_5_b1_sep16_scaffold_335_6
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(6403..10125)
DNA (3723bp) protein (1241aa)
hypothetical protein Tax=Microbacterium sp. 292MF RepID=UPI0003626AEF
Uncharacterized protein {ECO:0000313|EMBL:KGN31309.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
TPR repeat-containing adenylate/guanylate cyclase
PLM2_5_b1_sep16_scaffold_335_7
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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10209..16376
DNA (6168bp) protein (2056aa)
Putative uncharacterized protein Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQ50_9BACT
hypothetical protein
Tax=RBG_16_Chloroflexi_51_9_curated
PLM2_5_b1_sep16_scaffold_335_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(16383..16754)
DNA (372bp) protein (124aa)
SCP-like extracellular Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA35_CONWI
hypothetical protein
SCP-like extracellular {ECO:0000313|EMBL:ADB53130.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_335_trna_1
unknown

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16968..17042
DNA (75bp)
transferRNA Pro
PLM2_5_b1_sep16_scaffold_335_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(17054..17647)
DNA (594bp) protein (198aa)
hypothetical protein Tax=Streptomyces sp. CNT372 RepID=UPI00037E1D39
fructose-2,6-bisphosphatase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_335_trna_6
unknown

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comp(17828..17898)
DNA (71bp)
transferRNA Gly
PLM2_5_b1_sep16_scaffold_335_10
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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17975..19036
DNA (1062bp) protein (354aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WAW6_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ46363.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM2_5_b1_sep16_scaffold_335_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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19181..19624
DNA (444bp) protein (148aa)
SCP-like extracellular Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FA35_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_335_trna_2
unknown

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19659..19730
DNA (72bp)
transferRNA Arg
PLM2_5_b1_sep16_scaffold_335_12
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19904..20347
DNA (444bp) protein (148aa)
Ion transport 2 domain protein Tax=Frankia sp. CN3 RepID=G6H9Y6_9ACTO
Ion transport 2 domain-containing protein
Ion transport 2 domain protein {ECO:0000313|EMBL:ADP79622.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM2_5_b1_sep16_scaffold_335_13
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20466..20777
DNA (312bp) protein (104aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036317FE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV81084.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM2_5_b1_sep16_scaffold_335_14
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

20807..21388
DNA (582bp) protein (194aa)
Peptidase C56, PfpI Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUD8_RUBXD
peptidase C56, PfpI
Peptidase C56, PfpI {ECO:0000313|EMBL:ABG04990.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM2_5_b1_sep16_scaffold_335_trna_5
unknown

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comp(21637..21707)
DNA (71bp)
transferRNA Arg
PLM2_5_b1_sep16_scaffold_335_trna_4
unknown

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comp(21841..21913)
DNA (73bp)
transferRNA His
PLM2_5_b1_sep16_scaffold_335_15
unknown

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comp(21963..22166)
DNA (204bp) protein (68aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_335_trna_3
unknown

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22263..22348
DNA (86bp)
transferRNA Leu
PLM2_5_b1_sep16_scaffold_335_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

22348..23316
DNA (969bp) protein (323aa)
Cupin domain protein Tax=Patulibacter medicamentivorans RepID=H0E971_9ACTN
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_335_17
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

23352..24716
DNA (1365bp) protein (455aa)
Trigger factor {ECO:0000255|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000255|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000255|HAMAP-Rule:MF_00303};; PPIase {ECO:0000255|HAMAP-Rule:MF_00303}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Trigger factor Tax=Rubrobacter xylanophilus RepID=TIG_RUBXD
trigger factor
PLM2_5_b1_sep16_scaffold_335_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

24713..25324
DNA (612bp) protein (204aa)
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
ATP-dependent Clp protease proteolytic subunit Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9K5_CONWI
PLM2_5_b1_sep16_scaffold_335_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

25358..26632
DNA (1275bp) protein (425aa)
ATP-dependent Clp protease ATP-binding subunit ClpX Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9K6_CONWI
ATP-dependent Clp protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_335_20
unknown

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comp(26629..26703)
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 26 items

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