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PLM2_5_b1_sep16_scaffold_368

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_368_1
unknown

Not on your lists

comp(3..155)
DNA (153bp) protein (51aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_368_2
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(332..1165)
DNA (834bp) protein (278aa)
Two component transcriptional regulator, winged helix family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2E0_CONWI
two component transcriptional regulator
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_368_3
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1235..2899)
DNA (1665bp) protein (555aa)
2-octaprenylphenol hydroxylase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWC7_RUBXD
putative unusual protein kinase
Tax=RBG_16_Actinobacteria_64_13_curated
PLM2_5_b1_sep16_scaffold_368_4
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(2925..3617)
DNA (693bp) protein (231aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase Tax=Bacillus methanolicus PB1 RepID=I3DWS9_BACMT
1-acyl-sn-glycerol-3-phosphate acyltransferase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_368_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(3614..3940)
DNA (327bp) protein (109aa)
Putative uncharacterized protein Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CI80_DESK7
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_368_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(3924..6623)
DNA (2700bp) protein (900aa)
Protein-export membrane protein SecD (TC 3.A.5.1.1) Tax=Patulibacter medicamentivorans RepID=H0EAX0_9ACTN
Protein-export membrane protein SecD (TC 3.A.5.1.1) {ECO:0000313|EMBL:EHN09188.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
protein-export membrane protein SecD
PLM2_5_b1_sep16_scaffold_368_7
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6684..6989)
DNA (306bp) protein (102aa)
Putative preprotein translocase YajC subunit Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HER2_ACTM4
putative preprotein translocase YajC subunit
Preprotein translocase subunit YajC {ECO:0000313|EMBL:KHD74940.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
PLM2_5_b1_sep16_scaffold_368_8
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6977..8104)
DNA (1128bp) protein (376aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Queuine tRNA-ribosyltransferase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWD4_RUBXD
PLM2_5_b1_sep16_scaffold_368_9
unknown

Not on your lists

comp(8101..8394)
DNA (294bp) protein (98aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_368_10
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(8552..9496)
DNA (945bp) protein (315aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3D8_SPHTD
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_368_11
unknown

Not on your lists

9524..9970
DNA (447bp) protein (149aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_368_12
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10060..10761)
DNA (702bp) protein (234aa)
Uncharacterized protein Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E7P1_METEZ
TIGR00374: TIGR00374 family protein
TIGR00374: TIGR00374 family protein {ECO:0000313|EMBL:AHY47027.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM2_5_b1_sep16_scaffold_368_13
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(10944..11846)
DNA (903bp) protein (301aa)
UbiA prenyltransferase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C133_SPHTD
UbiA prenyltransferase
UbiA prenyltransferase {ECO:0000313|EMBL:ACZ37950.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM2_5_b1_sep16_scaffold_368_14
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(11866..13239)
DNA (1374bp) protein (458aa)
atm:ANT_22650 two-component sensor histidine kinase bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
integral membrane sensor signal transduction histidine kinase
Tax=RBG_16_Chloroflexi_48_8_curated
PLM2_5_b1_sep16_scaffold_368_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13252..13959)
DNA (708bp) protein (236aa)
Putative OmpR family two-component response regulator Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6B6_CALAS
putative OmpR family two-component response regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_368_16
unknown

Not on your lists

comp(13985..14458)
DNA (474bp) protein (158aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_368_17
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14512..16137
DNA (1626bp) protein (542aa)
N,N-dimethylformamidase large subunit (EC:3.5.1.56)
Uncharacterized protein Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7S6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHL96415.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
PLM2_5_b1_sep16_scaffold_368_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(16134..16997)
DNA (864bp) protein (288aa)
FadB; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEG3_9FIRM
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_368_19
Thermoactinomyces sp. Gus2-1, Thermoactinomyces, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17159..18310)
DNA (1152bp) protein (384aa)
Fatty oxidation complex Tax=Desmospora sp. 8437 RepID=F5SCK0_9BACL
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KFZ40455.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Thermoactinomyces.;" source="Thermoactinomyces sp. Gus2-1.;"
acetyl-CoA acetyltransferase
PLM2_5_b1_sep16_scaffold_368_20
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

18332..19759
DNA (1428bp) protein (476aa)
Aldehyde Dehydrogenase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A1K7_THECD
aldehyde dehydrogenase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_368_21
unknown

Not on your lists

19771..19926
DNA (156bp) protein (52aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_368_22
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

20088..20552
DNA (465bp) protein (155aa)
Uncharacterized protein Tax=Firmicutes bacterium CAG:114 RepID=R5HE08_9FIRM
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_368_23
unknown

Not on your lists

20552..21232
DNA (681bp) protein (227aa)
Uncharacterized protein Tax=Mycobacterium hassiacum DSM 44199 RepID=K5BBB6_9MYCO
immunogenic protein precursor
PLM2_5_b1_sep16_scaffold_368_24
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

21380..21829
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2A9_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_368_25
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

21864..23867
DNA (2004bp) protein (668aa)
PutativeDNA-binding protein Tax=Patulibacter medicamentivorans RepID=H0E2I1_9ACTN
transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_368_26
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(23864..25660)
DNA (1797bp) protein (599aa)
atm:ANT_13900 two-component sensor histidine kinase bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative two-component hybrid sensor and regulator
Tax=RBG_13_Chloroflexi_68_17_curated
PLM2_5_b1_sep16_scaffold_368_27
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(25657..25839)
DNA (183bp) protein (61aa)
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 27 items

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