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PLM2_5_b1_sep16_scaffold_368_15

Organism: PLM2_5_b1_sep16_Actinobacteria_70_17

near complete RP 39 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 8 / 38
Location: comp(13252..13959)

Top 3 Functional Annotations

Value Algorithm Source
Putative OmpR family two-component response regulator Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6B6_CALAS similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 222.0
  • Bit_score: 246
  • Evalue 1.80e-62
putative OmpR family two-component response regulator similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 222.0
  • Bit_score: 246
  • Evalue 5.20e-63
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 233.0
  • Bit_score: 345
  • Evalue 5.30e-92

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGGGAGCCCAGGCGCAGTCGATTCTGGTTGTCGAGGATGAGTCCTCGATCGCCTCGTTCGTCGCGCTCTACCTGAAGAACGCCGGCTACTCCGTGAGCATCGTCGCCACCGGCAAGGAGGCGCTTTCGCACGTGGAGGGCGAGCGGCCCGACCTGATCGTGCTCGACCTGATGCTGCCCGACGTCGACGGCATAGAAGTCTGCCGCCGCATCCGCCAGGACTCCGACGTGCCGATCCTGATGCTGACCGCGCGCGACGAGGACGTGGACAAGATCATCGGGCTCGAGGTCGGCGCCGACGACTACCTGACCAAGCCGTTCAACCCGCGCGAGCTGGTCGCGCGCGTGAAGTCGATCCTGCGCCGCTCGGTCTCCGACCGGCGCGAGAGCGAGACGAAGCAGATCAAGCACGGCGACCTCGAGATCGACGCGGGCCGCCGCGAGGCGCGCGTCGCGGGGACGGAGATCCAGCTCGCGCCGAAGGAGTTCGACTTGCTCTGGGAGCTGCTCGACCACCACGGGATCGTGCTCACCCGCGATCAGCTGCTCGAGCGGGTGTGGGGCTACACCTTCGCGGGCGACACGCGCACCGTCGACGTCCACGTGCGGCAGCTGCGGCGGAAGCTCGGCGAGGCCTCGCCGATCGTCACGGTCTGGGGGGTCGGCTACAAGGTCGCTCCCTCGCGGGACGCGGCGGTGAGCGCCTAG
PROTEIN sequence
Length: 236
MGAQAQSILVVEDESSIASFVALYLKNAGYSVSIVATGKEALSHVEGERPDLIVLDLMLPDVDGIEVCRRIRQDSDVPILMLTARDEDVDKIIGLEVGADDYLTKPFNPRELVARVKSILRRSVSDRRESETKQIKHGDLEIDAGRREARVAGTEIQLAPKEFDLLWELLDHHGIVLTRDQLLERVWGYTFAGDTRTVDVHVRQLRRKLGEASPIVTVWGVGYKVAPSRDAAVSA*