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PLM2_5_b1_sep16_scaffold_478

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_478_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(3..143)
DNA (141bp) protein (47aa)
peptidase, M20/M25/M40 family
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_478_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(130..837)
DNA (708bp) protein (236aa)
Tryptophan 2,3-dioxygenase (EC:1.13.11.11)
tryptophan 23-dioxygenase Tax=Streptomyces sp. LaPpAH-202 RepID=UPI00037507D0
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_478_3
unknown

Not on your lists

comp(834..1205)
DNA (372bp) protein (124aa)
fosfomycin resistance protein (EC:2.5.1.-)
hypothetical protein Tax=Nocardiopsis potens RepID=UPI00034B95D1
PLM2_5_b1_sep16_scaffold_478_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

1227..2489
DNA (1263bp) protein (421aa)
ATPase, AAA family Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AA20_CARHZ
recombination factor protein RarA
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_478_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2530..3813
DNA (1284bp) protein (428aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_478_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

3882..4316
DNA (435bp) protein (145aa)
OsmC-like protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZQ7_RUBXD
OsmC-like protein
OsmC-like protein {ECO:0000313|EMBL:ABG03121.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM2_5_b1_sep16_scaffold_478_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(4313..4987)
DNA (675bp) protein (225aa)
Metallophosphoesterase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDN1_CONWI
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ADB49605.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_478_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

5008..5802
DNA (795bp) protein (265aa)
alpha/beta hydrolase Tax=Pseudonocardia sp. P1 RepID=UPI0001FFED3A
alpha/beta hydrolase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_478_9
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5872..6702)
DNA (831bp) protein (277aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus hesperidum URH17-3-68.;"
Arginase Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9E6L5_9BACL
arginase
PLM2_5_b1_sep16_scaffold_478_10
Propionibacterium acidifaciens, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6813..7208
DNA (396bp) protein (132aa)
Response regulator receiver domain protein Tax=Propionibacterium acidifaciens F0233 RepID=U2QDJ6_9ACTO
Response regulator receiver domain protein {ECO:0000313|EMBL:ERK54259.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidifaciens F0233.;"
two component transcriptional regulator, LuxR family
PLM2_5_b1_sep16_scaffold_478_trna_1
unknown

Not on your lists

comp(7209..7281)
DNA (73bp)
transferRNA Phe
PLM2_5_b1_sep16_scaffold_478_11
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(7370..8008)
DNA (639bp) protein (213aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EEN4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF83146.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
type 11 methyltransferase
PLM2_5_b1_sep16_scaffold_478_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8005..8811)
DNA (807bp) protein (269aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00036A59F7
Hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_478_13
unknown

Not on your lists

comp(8884..9543)
DNA (660bp) protein (220aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_478_14
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(9625..10455)
DNA (831bp) protein (277aa)
porphobilinogen deaminase (EC:2.5.1.61)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037DA160
Tax=RBG_16_Spirochaete_67_19_curated
PLM2_5_b1_sep16_scaffold_478_15
unknown

Not on your lists

comp(10455..10607)
DNA (153bp) protein (51aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_478_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10705..11412)
DNA (708bp) protein (236aa)
Cytochrome c assembly protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Z5_CONWI
cytochrome C assembly protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_478_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11453..13438
DNA (1986bp) protein (662aa)
cycK; cytochrome c-type biogenesis protein cycK bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
cytochrome c assembly protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_478_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13428..14069)
DNA (642bp) protein (214aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000369A575
cytochrome C biogenesis protein CcmB
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_478_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14062..14646)
DNA (585bp) protein (195aa)
ABC transporter, ATP-binding protein Tax=Collinsella intestinalis DSM 13280 RepID=C4FBA3_9ACTN
cytochrome ABC transporter ATP-binding component
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_478_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14643..15497)
DNA (855bp) protein (285aa)
4-hydroxybenzoate polyprenyltransferase, putative bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
4-hydroxybenzoate polyprenyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_478_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15592..16059)
DNA (468bp) protein (156aa)
molybdopterin adenylyltransferase (EC:2.7.7.75)
Molybdopterin adenylyltransferase Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C9J9_DESTA
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_478_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(16068..16463)
DNA (396bp) protein (132aa)
Cyclic pyranopterin monophosphate synthase accessory protein Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QE44_DESB2
molybdenum cofactor biosynthesis protein C
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_478_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(16502..18085)
DNA (1584bp) protein (528aa)
aldehyde dehydrogenase Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B6970E
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
succinate-semialdehyde dehydrogenase (NAD(P)+)
PLM2_5_b1_sep16_scaffold_478_24
unknown

Not on your lists

18131..18418
DNA (288bp) protein (96aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_478_25
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(18415..19884)
DNA (1470bp) protein (490aa)
alpha,alpha-trehalose-phosphate synthase (UDP-forming) (EC:2.4.1.15)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000313|EMBL:ADB54309.1}; EC=2.4.1.15 {ECO:0000313|EMBL:ADB54309.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3T4_CONWI
PLM2_5_b1_sep16_scaffold_478_26
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(19921..21207)
DNA (1287bp) protein (429aa)
Glycosyl transferase group 1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3T3_CONWI
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADB54308.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_478_27
Listeria weihenstephanensis, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21244..21657)
DNA (414bp) protein (138aa)
Serine-protein kinase RsbW {ECO:0000313|EMBL:EUJ41456.1}; EC=2.7.11.1 {ECO:0000313|EMBL:EUJ41456.1};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria weihenstephanensis FSL R9-0317.;"
Putative anti-sigma regulatory factor Tax=Eubacterium limosum (strain KIST612) RepID=E3GJI9_EUBLK
putative anti-sigma regulatory factor
PLM2_5_b1_sep16_scaffold_478_28
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(21737..22945)
DNA (1209bp) protein (403aa)
Peptidase S1 and S6 chymotrypsin/Hap Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3T2_CONWI
peptidase S1 and S6 chymotrypsin/Hap
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:ADB54307.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_478_29
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(22962..23375)
DNA (414bp) protein (138aa)
histidine kinase Tax=Curtobacterium ginsengisoli RepID=UPI0003B52E10
periplasmic sensor signal transduction histidine kinase
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 30 items

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