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PLM2_5_b1_sep16_scaffold_702

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_702_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2..2029)
DNA (2028bp) protein (676aa)
adenylate/guanylate cyclase bin=bin8_Chloro species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
adenylate/guanylate cyclase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_702_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2089..3435
DNA (1347bp) protein (449aa)
phosphomannomutase; K01840 phosphomannomutase [EC:5.4.2.8] bin=CNBR_ACIDO species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphomannomutase (EC:5.4.2.8)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_702_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3464..4447
DNA (984bp) protein (328aa)
Transcriptional regulator, LysR family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EYT5_CONWI
LysR family transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_702_4
unknown

Not on your lists

4475..5161
DNA (687bp) protein (229aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_702_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

5171..5629
DNA (459bp) protein (153aa)
Thioesterase superfamily protein Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y013_LEPCP
thioesterase superfamily protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_702_6
S_OP1_64_32, KB1, Bacteria

Not on your lists

5626..6075
DNA (450bp) protein (150aa)
GAF sensor protein; K07170 GAF domain-containing protein bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
GAF sensor protein
Tax=S_OP1_64_32
PLM2_5_b1_sep16_scaffold_702_7
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

6086..6238
DNA (153bp) protein (51aa)
Uncharacterized protein Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11M15_MESSB
hypothetical protein
Tax=RBG_16_Planctomycetes_43_13_curated
PLM2_5_b1_sep16_scaffold_702_8
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

6282..7577
DNA (1296bp) protein (432aa)
methyltransferase Tax=Salinispora pacifica RepID=UPI00036E896E
type 11 methyltransferase
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
PLM2_5_b1_sep16_scaffold_702_9
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

7574..9484
DNA (1911bp) protein (637aa)
Sulfatase bin=GWA2_Elusimicrobia_69_24 species=Micromonospora lupini genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
sulfatase
Tax=GWA2_Elusimicrobia_69_24_curated
PLM2_5_b1_sep16_scaffold_702_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9757..11964)
DNA (2208bp) protein (736aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDZ0_CONWI
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_702_11
unknown

Not on your lists

comp(12174..12371)
DNA (198bp) protein (66aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_702_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(12390..14252)
DNA (1863bp) protein (621aa)
Single-stranded-DNA-specific exonuclease RecJ Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY9_CONWI
single-stranded-DNA-specific exonuclease RecJ
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_702_13
unknown

Not on your lists

comp(14292..14576)
DNA (285bp) protein (95aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_702_14
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

14612..15070
DNA (459bp) protein (153aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2E3_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_702_15

Not on your lists

15106..15417
DNA (312bp) protein (104aa)
ArsR family transcriptional regulator Tax=mine drainage metagenome RepID=T1CDM4_9ZZZZ
ArsR family transcriptional regulator {ECO:0000313|EMBL:EQD64860.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Ars family transcriptional regulator
PLM2_5_b1_sep16_scaffold_702_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

15414..15887
DNA (474bp) protein (158aa)
Activator of Hsp90 ATPase 1 family protein Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SHW6_THEM7
activator of Hsp90 ATPase 1 family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_702_17
unknown

Not on your lists

comp(15884..16192)
DNA (309bp) protein (103aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_702_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(16192..17211)
DNA (1020bp) protein (340aa)
Holliday junction ATP-dependent DNA helicase RuvB Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SIW8_THEM7
Holliday junction DNA helicase subunit RuvB
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_702_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(17208..17717)
DNA (510bp) protein (170aa)
Holliday junction ATP-dependent DNA helicase RuvA Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY3_CONWI
Holliday junction DNA helicase RuvA
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_702_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(17826..18317)
DNA (492bp) protein (164aa)
Crossover junction endodeoxyribonuclease RuvC Tax=Moorella thermoacetica (strain ATCC 39073) RepID=RUVC_MOOTA
crossover junction endodeoxyribonuclease RuvC
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_702_21
unknown

Not on your lists

18376..18837
DNA (462bp) protein (154aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_702_22
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18834..19568)
DNA (735bp) protein (245aa)
Methyltransferase domain protein Tax=Streptomyces ipomoeae 91-03 RepID=L1KUJ5_9ACTO
putative methyltransferase
Methyltransferase domain protein {ECO:0000313|EMBL:EKX64277.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
PLM2_5_b1_sep16_scaffold_702_23
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(19568..20320)
DNA (753bp) protein (251aa)
Probable transcriptional regulatory protein Rxyl_1318 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Y1318_RUBXD
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_702_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(20307..20558)
DNA (252bp) protein (84aa)
Glutamine amidotransferase subunit PdxT Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=PDXT_RUBXD
SNO glutamine amidotransferase
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 24 items

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