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PLM2_5_b1_sep16_scaffold_2130

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_2130_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(2..427)
DNA (426bp) protein (142aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI00036C5B2F
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_2130_2
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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464..3676
DNA (3213bp) protein (1071aa)
DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit Tax=Nitrolancetus hollandicus Lb RepID=I4EHQ9_9CHLR
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_2130_3
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3860..5668
DNA (1809bp) protein (603aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MXF5_9ACTO
Glycosyl hydrolase, family 15 {ECO:0000313|EMBL:EFH30895.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
glycoside hydrolase
PLM2_5_b1_sep16_scaffold_2130_4
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5665..6147
DNA (483bp) protein (161aa)
hypothetical protein Tax=Saccharopolyspora spinosa RepID=UPI0002379AC5
Predicted protein {ECO:0000313|EMBL:EFH30894.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_2130_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(6144..6455)
DNA (312bp) protein (104aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_2130_6
unknown

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6478..7263
DNA (786bp) protein (262aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_2130_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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7260..8339
DNA (1080bp) protein (360aa)
Aminotransferase class V Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F036_CONWI
class V aminotransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_2130_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8336..8899)
DNA (564bp) protein (188aa)
Metal dependent phosphohydrolase Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SMN3_THEM7
metal dependent phosphohydrolase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_2130_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

8925..10238
DNA (1314bp) protein (438aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F092_CONWI
UDP-N-acetylglucosamine1-carboxyvinyltransferase
PLM2_5_b1_sep16_scaffold_2130_10
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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10238..10777
DNA (540bp) protein (180aa)
Imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|SAAS:SAAS00218099, ECO:0000313|EMBL:AJQ28255.1}; EC=4.2.1.19 {ECO:0000256|SAAS:SAAS00263879, ECO:0000313|EMBL:AJQ28255.1};; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.;"
Imidazoleglycerol-phosphate dehydratase Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=HIS7_SYNFM
PLM2_5_b1_sep16_scaffold_2130_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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10777..11166
DNA (390bp) protein (130aa)
Endoribonuclease L-PSP bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
endoribonuclease L-PSP
Tax=GWC2_Rokubacteria_70_16_curated
PLM2_5_b1_sep16_scaffold_2130_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11185..12417
DNA (1233bp) protein (411aa)
Putative poly A polymerase Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67NF3_SYMTH
poly A polymerase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_2130_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

12414..13133
DNA (720bp) protein (240aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F082_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB51942.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM2_5_b1_sep16_scaffold_2130_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13138..13662
DNA (525bp) protein (175aa)
Alanine racemase domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F081_CONWI
alanine racemase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_2130_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13675..14235
DNA (561bp) protein (187aa)
Cell division protein SepF Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F080_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_2130_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14378..14686
DNA (309bp) protein (103aa)
cell division protein ZapA Tax=Patulibacter americanus RepID=UPI0003B69585
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_2130_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14697..15125
DNA (429bp) protein (143aa)
DivIVA domain Tax=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) RepID=D9TPQ6_THETC
DivIVA domain
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_2130_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

15155..15436
DNA (282bp) protein (94aa)
UPF0235 protein WQQ_16460 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZHY2_9GAMM
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_2130_19
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

15433..15801
DNA (369bp) protein (123aa)
Transcriptional regulator, TraR/DksA family Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QPI2_ACEAZ
TraR/DksA family transcriptional regulator
Tax=RBG_16_Actinobacteria_64_13_curated
PLM2_5_b1_sep16_scaffold_2130_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

15899..16450
DNA (552bp) protein (184aa)
hypothetical protein Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI000369E77E
signal peptidase II
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_2130_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

16594..17343
DNA (750bp) protein (250aa)
Pseudouridine synthase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F076_CONWI
pseudouridine synthase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_2130_22
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17313..18269)
DNA (957bp) protein (319aa)
GAF domain/GGDEF domain protein bin=GWC2_Nitrospirae_57_13 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
diguanylate cyclase/phosphodiesterase
Tax=CG_Solirubrobact_01
PLM2_5_b1_sep16_scaffold_2130_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists


18433..19278
DNA (846bp) protein (282aa)
30S ribosomal protein S2 Tax=Desulfurispora thermophila RepID=UPI00037E4013
30S ribosomal protein S2
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_2130_24
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

19275..20078
DNA (804bp) protein (268aa)
endo-1,4-D-glucanase Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00035D1C5C
tsf; endo-1,4-D-glucanase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_2130_25
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

20075..20833
DNA (759bp) protein (253aa)
uridylate kinase (EC:2.7.4.22)
uridylate kinase Tax=Patulibacter americanus RepID=UPI0003B4720C
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_2130_26
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

20847..21407
DNA (561bp) protein (187aa)
Ribosome-recycling factor Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F072_CONWI
ribosome recycling factor
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_2130_27
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

21514..21834
DNA (321bp) protein (107aa)
UDP pyrophosphate synthase Tax=Patulibacter americanus RepID=UPI0003B475A2
uppS: di-trans,poly-cis-decaprenylcistransferase
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 27 items

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