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PLM2_5_b1_sep16_scaffold_893_8

Organism: PLM2_5_b1_sep16_Actinobacteria_70_17

near complete RP 39 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 8 / 38
Location: 4647..5237

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Nitrolancetus hollandicus Lb RepID=I4EEG4_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 176.0
  • Bit_score: 153
  • Evalue 1.30e-34
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 179.0
  • Bit_score: 152
  • Evalue 6.50e-35
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 193.0
  • Bit_score: 281
  • Evalue 6.00e-73

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGGGCGAGACCACTCCAGAAGCGGAGCCGAGGAAGCTGGCCGAAGAGGCCCGCGACCGGGTCCATTTCGAGGAGGAGGCACTCGAGCTCGCGGATCAGGTGTACCGCGTCGCGCGGCGCCTGGTGTCCACCCGTGAAGAGGCGGAGGACCTGATGCAGGAGACCTATGCGCGCGCGTTCCGGGCCTGGCGCTCCTTCCAGCCGGGGACGAACCTGCGCGCGTGGCTCCTGCGCATCCTCACGAACCTCAACATCGACCGCGGCCGCCGGCAGCAGCGCTCGCCGGACCTGCAGCCGCTCGAGGAAGGCGACTACTACCTCTACAACAAGCTCGAGGAAGCCGGACGCGAGCCGAACGTCGAGCAGGAGCGCGTGGACGAGCGGCTCTCGCAGGACGACGTGGTCTCGGCGCTCTCGGCGGTGCCGCACGACTTCCGCGACGTGATCGTGCTCGTCGACATCGGCGACTTCAGCTACGCGGACGCGGCGCAGATCCTCGAGATTCCGATCGGGACCGTGATGTCGCGCCTGCACCGCGGGCGGCGTATCCTGAAGCGCGAGCTCGCGGAGCAAACGGTGGGAAGCGTCTGA
PROTEIN sequence
Length: 197
MGETTPEAEPRKLAEEARDRVHFEEEALELADQVYRVARRLVSTREEAEDLMQETYARAFRAWRSFQPGTNLRAWLLRILTNLNIDRGRRQQRSPDLQPLEEGDYYLYNKLEEAGREPNVEQERVDERLSQDDVVSALSAVPHDFRDVIVLVDIGDFSYADAAQILEIPIGTVMSRLHRGRRILKRELAEQTVGSV*