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PLM2_5_b1_sep16_scaffold_893

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_893_1
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(3..1127)
DNA (1125bp) protein (375aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
Dihydrolipoyl dehydrogenase Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NN08_MARHT
PLM2_5_b1_sep16_scaffold_893_2
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1172..1792
DNA (621bp) protein (207aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGF7_ANADF
ECF subfamily RNA polymerase sigma-24 factor
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM2_5_b1_sep16_scaffold_893_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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1789..2040
DNA (252bp) protein (84aa)
Putative transmembrane anti-sigma factor Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGF6_ANADF
putative transmembrane anti-sigma factor
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM2_5_b1_sep16_scaffold_893_4
Emiliania huxleyi, Emiliania, Isochrysidales, Eukaryota

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comp(2204..2416)
DNA (213bp) protein (71aa)
Uncharacterized protein Tax=Emiliania huxleyi CCMP1516 RepID=R1F1Y2_EMIHU
Uncharacterized protein {ECO:0000313|EMBL:EOD29216.1, ECO:0000313|EnsemblProtists:EOD29216}; species="Eukaryota; Haptophyceae; Isochrysidales; Noelaerhabdaceae; Emiliania.;" source="Emiliania huxleyi CCMP1516.;"
hypothetical protein
PLM2_5_b1_sep16_scaffold_893_5
unknown

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2581..3144
DNA (564bp) protein (188aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_893_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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3173..4273
DNA (1101bp) protein (367aa)
Putative glutamate--cysteine ligase 2-3 {ECO:0000255|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000255|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2-3 {ECO:0000255|HAMAP-Rule:MF_01609}; Short=GCS 2-3 {ECO:0000255|HAMAP-Rule:MF_01609};; Short=Gamma-GCS 2-3 {ECO:0000255|HAMAP-Rule:MF_01609};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Carboxylate-amine ligase Rxyl_1350 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=CAAL2_RUBXD
carboxylate-amine ligase
PLM2_5_b1_sep16_scaffold_893_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

4274..4492
DNA (219bp) protein (73aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_893_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

4647..5237
DNA (591bp) protein (197aa)
RNA polymerase sigma factor Tax=Nitrolancetus hollandicus Lb RepID=I4EEG4_9CHLR
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_893_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

5237..5482
DNA (246bp) protein (82aa)
Putative transmembrane anti-sigma factor Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C359_SPHTD
putative transmembrane anti-sigma factor
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_893_10
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5374..5922)
DNA (549bp) protein (183aa)
Peptidase M23B Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRW7_9FIRM
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:AEG16982.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
PLM2_5_b1_sep16_scaffold_893_11
unknown

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comp(5947..6579)
DNA (633bp) protein (211aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_893_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(6615..7157)
DNA (543bp) protein (181aa)
Purine catabolism protein PucB Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y9I4_THEBD
purine catabolism protein PucB
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_893_13
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7150..7995)
DNA (846bp) protein (282aa)
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
molybdopterin dehydrogenase FAD-binding
Tax=RBG_13_Deltaproteobacteria_51_10_curated
PLM2_5_b1_sep16_scaffold_893_14
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(7976..10237)
DNA (2262bp) protein (754aa)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding Tax=uncultured candidate division OP1 bacterium RepID=H5SQG5_9BACT
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding {ECO:0000313|EMBL:BAL58401.1}; species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
PLM2_5_b1_sep16_scaffold_893_15
RIFCSPLOWO2_12_FULL_Gammaproteobacteria_52_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10225..10662)
DNA (438bp) protein (146aa)
Carbon-monoxide dehydrogenase Tax=Mycobacterium smegmatis MKD8 RepID=L8FC28_MYCSM
(2Fe-2S)-binding domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_52_10_curated
PLM2_5_b1_sep16_scaffold_893_16
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(10655..11806)
DNA (1152bp) protein (384aa)
Amidohydrolase 2 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBT4_CONWI
amidohydrolase 2
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_893_17
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11890..12567
DNA (678bp) protein (226aa)
hypothetical protein Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI000375759B
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_71_12_curated
PLM2_5_b1_sep16_scaffold_893_18
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

12580..13716
DNA (1137bp) protein (379aa)
Peptidase M24 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBK0_CONWI
peptidase M24
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_893_19
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

13716..15671
DNA (1956bp) protein (652aa)
Acetyl-coenzyme A synthetase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFU2_THET1
acetate/CoA ligase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_893_20
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

15772..16287
DNA (516bp) protein (172aa)
hypothetical protein Bm3-1_04649 bin=GWC2_Chloroflexi_73_18 species=Bacillus sp. m3-13 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
HTH-type transcriptional regulator hmrR
Tax=GWC2_RIF_CHLX_73_18_curated
PLM2_5_b1_sep16_scaffold_893_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(16289..17563)
DNA (1275bp) protein (425aa)
peptidase M16 domain-containing protein bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
peptidase M16 domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_893_22
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(17560..17895)
DNA (336bp) protein (112aa)
Thioesterase superfamily protein Tax=Chloroflexus RepID=A9WFM6_CHLAA
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ABY33964.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
PLM2_5_b1_sep16_scaffold_893_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

17948..18820
DNA (873bp) protein (291aa)
SIS domain protein Tax=Streptomyces ipomoeae 91-03 RepID=L1KQD5_9ACTO
glucosamine-6-phosphate deaminase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_893_24
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(18774..19040)
DNA (267bp) protein (89aa)
NAD-dependent epimerase Tax=Frankia sp. Iso899 RepID=UPI0003B5CABB
putative NAD-dependent epimerase/dehydratase
Tax=RBG_16_Chloroflexi_57_11_curated
Displaying 24 items

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