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PLM2_5_b1_sep16_scaffold_2304_11

Organism: PLM2_5_b1_sep16_Actinobacteria_70_17

near complete RP 39 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 8 / 38
Location: comp(9214..10068)

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y9J9_THEBD similarity UNIREF
DB: UNIREF100
  • Identity: 37.0
  • Coverage: 119.0
  • Bit_score: 61
  • Evalue 1.00e-06
collagen triple helix repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 37.0
  • Coverage: 119.0
  • Bit_score: 61
  • Evalue 2.90e-07
Collagen triple helix repeat protein {ECO:0000313|EMBL:ADG90030.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.0
  • Coverage: 119.0
  • Bit_score: 61
  • Evalue 1.40e-06

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Taxonomy

Thermobispora bispora → Thermobispora → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGAGGTCCATCCTCGTAGCAGCGCTTGTCGCGCTGTTCGTCGGGGTGACCACCGCGCTTGGCGGCGGCAGCCGTGTGGCAGGTGCACATGGGCAGCTGGGCATCAAGAACGGCGTCATCTACGCGTGCGTCGAGACGAACGGCGGCGGCGCGACTGTGGGCGACCTGAAGCTGAACCACTGTCACAAGGGGTTCAAGCGGATCGCCTGGAACATCCGCGAGCGCACCGGGAAGGGCGCGAAGGGCGCGCCAGGTCCGCGGGGGCCGCAGGGCGCATCCGGCGCCAACGGCTCGAAGGGAGACAAGGGAGACAAGGGAGACCGCGCTCCAACGATGCTGCGCCTGACGGGCGACTTCGCGGGGACGAACGCGAGCGTTGCAACGTCCCTGGACGGCGTCACCTTCGGGCCGTACTCGGACGGCGGCGCCTGGGGCGGCTCGGTGGTCTACCACGGGGCAGACGGTCTGACCCTGGCCGGCCTCACGCAGCTGTCCTACACGATCGACCACTCCTCAAGGAACGACTCGCCGATTGCGGCTCCGTACCTGCGGATCTTCCTCGGCGGCGGCACGCACGATGTCATCTTCGATGCGACGAAGTGCGCGACCGCCGTCCCGCCGGAGGATCAGTTCAACACCTTCGAAGTCACGACCGGAGACGTTCGCTACGACGACGACTCGTGCGACGGCGTGCCGCCGGATCAGCAGCCGTGGGCGACCGTGGTCGCTGCGCACGGCAGCGAAGTGGTCAGCGGCATCTACGTGACCACCGGCTTCACGGGCGGATTGGACCTCACGGCCATCCTCCGCAGCCTGCGCGTCAACGGCCAGTCGTTCGTTTTTGGCCAGCCGTAG
PROTEIN sequence
Length: 285
MRSILVAALVALFVGVTTALGGGSRVAGAHGQLGIKNGVIYACVETNGGGATVGDLKLNHCHKGFKRIAWNIRERTGKGAKGAPGPRGPQGASGANGSKGDKGDKGDRAPTMLRLTGDFAGTNASVATSLDGVTFGPYSDGGAWGGSVVYHGADGLTLAGLTQLSYTIDHSSRNDSPIAAPYLRIFLGGGTHDVIFDATKCATAVPPEDQFNTFEVTTGDVRYDDDSCDGVPPDQQPWATVVAAHGSEVVSGIYVTTGFTGGLDLTAILRSLRVNGQSFVFGQP*