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PLM2_5_b1_sep16_scaffold_2304

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_b1_sep16_scaffold_2304_1
unknown

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36..320
DNA (285bp) protein (95aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_2304_2
BJP_IG2102_Coriobacteriales_64_17, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

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516..1439
DNA (924bp) protein (308aa)
tyrosine recombinase XerD subunit; K04763 integrase/recombinase XerD bin=RBG_19FT_COMBO_GAL15_69_19 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
tyrosine recombinase XerD
Tax=BJP_IG2102_Coriobacteriales_64_17
PLM2_5_b1_sep16_scaffold_2304_3
unknown

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comp(1633..2130)
DNA (498bp) protein (166aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_2304_4
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(2127..3308)
DNA (1182bp) protein (394aa)
Citrate synthase (Si) {ECO:0000313|EMBL:EHN09879.1}; EC=2.3.3.1 {ECO:0000313|EMBL:EHN09879.1};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
citrate (Si)-synthase (EC:2.3.3.1)
Citrate synthase (Si) Tax=Patulibacter medicamentivorans RepID=H0E8X9_9ACTN
PLM2_5_b1_sep16_scaffold_2304_5
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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3375..4466
DNA (1092bp) protein (364aa)
isocitrate dehydrogenase (NADP) (EC:1.1.1.41)
hypothetical protein Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI000365B819
Tax=RBG_16_Chloroflexi_68_14_curated
PLM2_5_b1_sep16_scaffold_2304_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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4463..5398
DNA (936bp) protein (312aa)
Malate dehydrogenase Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=MDH_THERP
malate dehydrogenase, NAD-dependent
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_2304_7
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

5564..6307
DNA (744bp) protein (248aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI00036D9B09
short-chain dehydrogenase/reductase SDR
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_2304_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6328..7329
DNA (1002bp) protein (334aa)
Peptidase S16 lon domain protein Tax=Frankia sp. EUN1f RepID=D3D9E2_9ACTO
PDZ/DHR/GLGF
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_2304_9
unknown

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7674..7976
DNA (303bp) protein (101aa)

This feature has no annotations

PLM2_5_b1_sep16_scaffold_2304_10
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(7947..9143)
DNA (1197bp) protein (399aa)
Putative transcriptional regulator of pyridoxine metabolism Tax=Modestobacter marinus (strain BC501) RepID=I4ESH6_MODMB
transcriptional regulator of pyridoxine metabolism
Tax=RBG_16_Actinobacteria_67_10_curated
PLM2_5_b1_sep16_scaffold_2304_11
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9214..10068)
DNA (855bp) protein (285aa)
Collagen triple helix repeat protein Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y9J9_THEBD
collagen triple helix repeat-containing protein
Collagen triple helix repeat protein {ECO:0000313|EMBL:ADG90030.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM2_5_b1_sep16_scaffold_2304_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10158..11042)
DNA (885bp) protein (295aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0L5_CONWI
succinyl-CoA synthetase subunit alpha
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_2304_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(11042..11695)
DNA (654bp) protein (218aa)
Methyltransferase type 11 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQF0_9CHLR
Methyltransferase type 11 {ECO:0000313|EMBL:EFH87617.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
methyltransferase type 11
PLM2_5_b1_sep16_scaffold_2304_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11692..12834)
DNA (1143bp) protein (381aa)
Succinyl-CoA ligase [ADP-forming] subunit beta Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=SUCC_RUBXD
sucCoAbeta: succinate-CoA ligase, beta subunit
Tax=RBG_16_Actinobacteria_68_12_curated
PLM2_5_b1_sep16_scaffold_2304_15
unknown

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comp(12847..12915)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 15 items

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