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PLM2_5_coex_sep16_scaffold_642

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM2_5_coex_sep16_scaffold_642_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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197..1108
DNA (912bp) protein (304aa)
SAM-dependent methyltransferase-like protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CUH2_9BACT
SAM-dependent methyltransferase-like protein {ECO:0000313|EMBL:EDY22210.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SAM-dependent methyltransferase
PLM2_5_coex_sep16_scaffold_642_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1156..1437
DNA (282bp) protein (94aa)
hypothetical protein Tax=Verrucomicrobium spinosum RepID=UPI00017446DF
Uncharacterized protein {ECO:0000313|EMBL:EDY20929.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM2_5_coex_sep16_scaffold_642_3
Photobacterium gaetbulicola, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1510..1719)
DNA (210bp) protein (70aa)
Uncharacterized protein Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WUH0_HALHL
Uncharacterized protein {ECO:0000313|EMBL:KHT62092.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium gaetbulicola.;"
hypothetical protein
PLM2_5_coex_sep16_scaffold_642_4
unknown

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1923..2438
DNA (516bp) protein (172aa)

This feature has no annotations

PLM2_5_coex_sep16_scaffold_642_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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2473..3642
DNA (1170bp) protein (390aa)
Tyrosine--tRNA ligase {ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|SAAS:SAAS00105716};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosyl-tRNA synthetase Tax=Chthoniobacter flavus Ellin428 RepID=B4D0P4_9BACT
PLM2_5_coex_sep16_scaffold_642_6
unknown

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comp(3701..4177)
DNA (477bp) protein (159aa)

This feature has no annotations

PLM2_5_coex_sep16_scaffold_642_7
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4347..5081)
DNA (735bp) protein (245aa)
Phosphoribosylformylglycinamidine synthase 1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQX5_9BACT
phosphoribosylformylglycinamidine synthase I
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM2_5_coex_sep16_scaffold_642_8
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(5090..5278)
DNA (189bp) protein (63aa)
hypothetical protein Tax=Cytophagales str. B6 RepID=UPI0003B5190C
Uncharacterized protein {ECO:0000313|EMBL:EDY21575.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM2_5_coex_sep16_scaffold_642_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(5278..5571)
DNA (294bp) protein (98aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formylglycinamide ribonucleotide amidotransferase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; Phosphoribosylformylglycinamidine synthase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phosphoribosylformylglycinamidine synthase subunit PurS (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase, purS Tax=Chthoniobacter flavus Ellin428 RepID=B4CVY4_9BACT
PLM2_5_coex_sep16_scaffold_642_10
CSP1_5_NC10, NC10, Bacteria

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comp(5622..7799)
DNA (2178bp) protein (726aa)
putative amylo-alpha-1,6-glucosidase (EC:3.2.1.33) bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
putative amylo-alpha-1,6-glucosidase (EC:3.2.1.33)
Tax=CSP1_5_NC10
PLM2_5_coex_sep16_scaffold_642_11
Burkholderia phenoliruptrix, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7799..8008)
DNA (210bp) protein (70aa)
Group 1 glucosyll transferase Tax=Burkholderia phenoliruptrix BR3459a RepID=K0E152_9BURK
group 1 glucosyll transferase
Group 1 glucosyll transferase {ECO:0000313|EMBL:AFT89399.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phenoliruptrix BR3459a.;"
PLM2_5_coex_sep16_scaffold_642_12
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(8196..9956)
DNA (1761bp) protein (587aa)
DNA polymerase LigD, ligase domain protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZP92_OPITP
DNA polymerase LigD ligase subunit
DNA polymerase LigD, ligase domain protein {ECO:0000313|EMBL:ACB77581.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM2_5_coex_sep16_scaffold_642_13
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10074..10481)
DNA (408bp) protein (136aa)
elongation factor Ts Tax=Verrucomicrobium spinosum RepID=UPI000174529D
tsf; elongation factor Ts
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
Displaying 13 items

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