ggKbase home page

PLM3-1_170_b1_sep16_scaffold_5394

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_5394_1
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(2..760)
DNA (759bp) protein (253aa)
coproporphyrinogen oxidase (EC:1.3.3.3)
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
Coproporphyrinogen-III oxidase, aerobic Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFD0_CHLTF
PLM3-1_170_b1_sep16_scaffold_5394_2
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(820..1956)
DNA (1137bp) protein (379aa)
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase activating enzyme bin=GWA2_Ignavibacteria_55_11 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_5394_3
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

comp(2045..3163)
DNA (1119bp) protein (373aa)
Zn finger domain-containing DnaJ-class molecular chaperone bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Zn finger domain-containing DnaJ-class molecular chaperone
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
PLM3-1_170_b1_sep16_scaffold_5394_4
unknown

Not on your lists

comp(3318..3527)
DNA (210bp) protein (70aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_5394_5
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(3534..3860)
DNA (327bp) protein (109aa)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI00035FCF5A
HigA family addiction module antidote protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_5394_6
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4345..4716)
DNA (372bp) protein (124aa)
hypothetical protein Tax=Dyella japonica RepID=UPI0002F7860B
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_5394_7
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

5126..5815
DNA (690bp) protein (230aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIV3_KORVE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Displaying 7 items

View Taxonomy