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PLM3-1_170_b1_sep16_scaffold_1195

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_1195_1
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1..144
DNA (144bp) protein (48aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036F8B58
amino acid permease family protein
Amino acid permease family protein {ECO:0000313|EMBL:ACO33914.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
PLM3-1_170_b1_sep16_scaffold_1195_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(132..608)
DNA (477bp) protein (159aa)
Uncharacterized protein Tax=Sulfobacillus acidophilus RepID=F8I6G5_SULAT
flavin reductase domain-containing FMN-binding protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ38645.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacillus acidophilus (strain TPY).;"
PLM3-1_170_b1_sep16_scaffold_1195_3
unknown

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comp(629..1006)
DNA (378bp) protein (126aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_1195_4
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(1011..1535)
DNA (525bp) protein (175aa)
Peptidyl-prolyl cis-trans isomerase Tax=Leptospirillum sp. Group IV 'UBA BS' RepID=T0Z3R4_9BACT
peptidyl-prolyl cis-trans isomerase, cyclophilin-type
Tax=CG_Arma_01
PLM3-1_170_b1_sep16_scaffold_1195_5
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1620..2618
DNA (999bp) protein (333aa)
NADPH-dependent thioredoxin reductase bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin1_lowGC organism_group=Unknown_CP
thioredoxin reductase
Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
PLM3-1_170_b1_sep16_scaffold_1195_6
GWA2_OD1_52_12, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

2714..3625
DNA (912bp) protein (304aa)
proline dehydrogenase (EC:1.5.99.8)
Proline dehydrogenase Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V8S6_TERSS
L-proline dehydrogenase {ECO:0000313|EMBL:KKW25068.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Kaiserbacteria) bacterium GW2011_GWA2_52_12.;"
PLM3-1_170_b1_sep16_scaffold_1195_7
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(3637..4266)
DNA (630bp) protein (210aa)
O-methyltransferase, family 3 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL13_KORVE
O-methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3-1_170_b1_sep16_scaffold_1195_8
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(4291..5004)
DNA (714bp) protein (238aa)
UPF0173 metal-dependent hydrolase Tter_0760 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFH1_THET1
beta-lactamase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b1_sep16_scaffold_1195_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(5019..5618)
DNA (600bp) protein (200aa)
Thioredoxin family protein Tax=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) RepID=A1S680_SHEAM
Redoxin domain protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_1195_10
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

5832..6101
DNA (270bp) protein (90aa)
Iron-sulfur cluster-binding protein Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3F8_ACIC5
iron-sulfur cluster-binding protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3-1_170_b1_sep16_scaffold_1195_11
uncultured crenarchaeote, Crenarchaeota, Archaea

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comp(6203..6508)
DNA (306bp) protein (102aa)
Hypothetical conserved protein Tax=uncultured crenarchaeote RepID=H5SBA5_9CREN
hypothetical protein
Hypothetical conserved protein {ECO:0000313|EMBL:BAL53441.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote.;"
PLM3-1_170_b1_sep16_scaffold_1195_12
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

6645..7703
DNA (1059bp) protein (353aa)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LIH0_9BACT
Chalcone and stilbene synthase domain protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3-1_170_b1_sep16_scaffold_1195_13
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

7792..8235
DNA (444bp) protein (148aa)
Putative cytochrome c oxidase subunit Tax=planctomycete KSU-1 RepID=I3IH53_9PLAN
cytochrome c oxidase subunit II
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3-1_170_b1_sep16_scaffold_1195_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8305..8670)
DNA (366bp) protein (122aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHL0_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF43640.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_1195_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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8739..9389
DNA (651bp) protein (217aa)
tRNA synthetase subunit beta bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3-1_170_b1_sep16_scaffold_1195_16
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

9438..11549
DNA (2112bp) protein (704aa)
amyA-2; alpha-amylase AmyA (EC:3.2.1.1) bin=GWC2_NOV_55_46 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_NOV_55_46 organism_group=Proteobacteria
4-alpha-glucanotransferase (EC:2.4.1.25)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_1195_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(11562..12530)
DNA (969bp) protein (323aa)
Methyltransferase Tax=Burkholderia RepID=D5WE60_BURSC bin=16ft_combo_ws3_JS1 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
methyltransferase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_1195_18
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12551..13744)
DNA (1194bp) protein (398aa)
hypothetical protein Tax=Burkholderia kururiensis RepID=UPI00034924E4
Serine/threonine kinase {ECO:0000313|EMBL:CDY76936.1}; Uncharacterized protein {ECO:0000313|EMBL:KDR39407.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
hypothetical protein
Displaying 18 items

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