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PLM3-1_170_b1_sep16_scaffold_3298

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_3298_1
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..684)
DNA (684bp) protein (228aa)
ABC transporter ATP-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ABC transporter
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM3-1_170_b1_sep16_scaffold_3298_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(722..2272)
DNA (1551bp) protein (517aa)
Efflux transporter, RND family, MFP subunit bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Efflux transporter, RND family, MFP subunit
Tax=CSP1_6_Rokubacteria
PLM3-1_170_b1_sep16_scaffold_3298_3
CSP1_5_NC10, NC10, Bacteria

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comp(2321..2722)
DNA (402bp) protein (134aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_3298_4
unknown

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comp(2712..3218)
DNA (507bp) protein (169aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_3298_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(3270..3947)
DNA (678bp) protein (226aa)
RNA polymerase sigma factor Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YV2_SOLUE
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b1_sep16_scaffold_3298_6

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4031..4402
DNA (372bp) protein (124aa)
Transcriptional regulator, XRE family (Fragment) Tax=mine drainage metagenome RepID=T0ZP95_9ZZZZ
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EQD31625.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative transcriptional regulator
PLM3-1_170_b1_sep16_scaffold_3298_7
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(4530..6089)
DNA (1560bp) protein (520aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
GMP synthase [glutamine-hydrolyzing] Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F486_ACIC5
PLM3-1_170_b1_sep16_scaffold_3298_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(6089..8239)
DNA (2151bp) protein (717aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037D79E6
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Displaying 8 items

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