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PLM3-1_170_b1_sep16_scaffold_98

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_98_1
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

299..1537
DNA (1239bp) protein (413aa)
thiI; thiamine biosynthesis protein thiI bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
putative thiamine biosynthesis protein ThiI
Tax=CG_Arma_02
PLM3-1_170_b1_sep16_scaffold_98_2
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1652..3268
DNA (1617bp) protein (539aa)
AMP-dependent synthetase and ligase Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WWF9_KYRT2
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADG07724.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
PLM3-1_170_b1_sep16_scaffold_98_3
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(3383..4657)
DNA (1275bp) protein (425aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ Tax=uncultured Acidobacteria bacterium cosmid p2H8 RepID=B1NMD5_9BACT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_98_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(4654..6063)
DNA (1410bp) protein (470aa)
argH; argininosuccinate lyase (EC:4.3.2.1) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
argininosuccinate lyase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_98_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(6060..7253)
DNA (1194bp) protein (398aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003786637
argininosuccinate synthase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_98_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(7265..8206)
DNA (942bp) protein (314aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037697D5
ornithine carbamoyltransferase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_98_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(8209..9510)
DNA (1302bp) protein (434aa)
acetylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023W8_SOLUE
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_98_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9507..10322)
DNA (816bp) protein (272aa)
Acetylglutamate kinase {ECO:0000255|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000255|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000255|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000255|HAMAP-Rule:MF_00082}; Short=AGK {ECO:0000255|HAMAP-Rule:MF_00082};; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Acetylglutamate kinase Tax=Koribacter versatilis (strain Ellin345) RepID=ARGB_KORVE
acetylglutamate kinase
PLM3-1_170_b1_sep16_scaffold_98_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(10319..11353)
DNA (1035bp) protein (345aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000372E71E
PLM3-1_170_b1_sep16_scaffold_98_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(11350..11799)
DNA (450bp) protein (150aa)
Arginine repressor Tax=Solibacter usitatus (strain Ellin6076) RepID=ARGR_SOLUE
ArgR family transcriptional regulator
Arginine repressor {ECO:0000255|HAMAP-Rule:MF_00173}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b1_sep16_scaffold_98_11
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12075..14240
DNA (2166bp) protein (722aa)
Uncharacterized protein Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WY68_ACISM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW68695.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
PLM3-1_170_b1_sep16_scaffold_98_12
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14278..15693
DNA (1416bp) protein (472aa)
Uncharacterized protein Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WY69_ACISM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW68696.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
PLM3-1_170_b1_sep16_scaffold_98_13
CG_PER_01, Peregrinibacteria, Bacteria

Not on your lists

comp(15750..16262)
DNA (513bp) protein (171aa)
Putative uncharacterized protein Tax=uncultured Rhodobacterales bacterium HF0010_04M21 RepID=E0XQH3_9RHOB
Tax=CG_PER_01
PLM3-1_170_b1_sep16_scaffold_98_14
RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16331..16555)
DNA (225bp) protein (75aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3ILC6_9PLAN
hypothetical protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated
PLM3-1_170_b1_sep16_scaffold_98_15
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(16586..16840)
DNA (255bp) protein (85aa)
Membrane protein YeaQ Tax=Geobacter metallireducens RepID=Q39WC9_GEOMG
membrane protein YeaQ
Tax=RBG_16_Caldithrix_48_16_curated
PLM3-1_170_b1_sep16_scaffold_98_16
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(17066..17266)
DNA (201bp) protein (67aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM3-1_170_b1_sep16_scaffold_98_17
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(17357..17560)
DNA (204bp) protein (68aa)
Cold-shock DNA-binding protein family Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QC1_SOLUE
cold-shock DNA-binding protein family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3-1_170_b1_sep16_scaffold_98_18
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

17927..20503
DNA (2577bp) protein (859aa)
AMP-dependent synthetase and ligase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMD0_KORVE
AMP-dependent synthetase/ligase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3-1_170_b1_sep16_scaffold_98_19
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

20553..21713
DNA (1161bp) protein (387aa)
PREDICTED: acetyl-CoA--deacetylcephalosporin C acetyltransferase-like Tax=Pantholops hodgsonii RepID=UPI0003C18AEF
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_98_20
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

21845..22459
DNA (615bp) protein (205aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IN90_KORVE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_98_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22456..24117
DNA (1662bp) protein (554aa)
Glucose-methanol-choline oxidoreductase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IN91_KORVE
GMC oxidoreductase
GMC oxidoreductase {ECO:0000313|EMBL:AHG87876.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3-1_170_b1_sep16_scaffold_98_22
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(24161..24505)
DNA (345bp) protein (115aa)
Anti-sigma factor antagonist Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INN3_KORVE
anti-sigma-factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b1_sep16_scaffold_98_23
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(24659..26179)
DNA (1521bp) protein (507aa)
Putative GAF sensor protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRK4_KORVE
GAF sensor protein
Putative GAF sensor protein {ECO:0000313|EMBL:ABF40496.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_98_trna_1
unknown

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comp(26308..26381)
DNA (74bp)
transferRNA Val
PLM3-1_170_b1_sep16_scaffold_98_24
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

26523..26909
DNA (387bp) protein (129aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INL6_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41534.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_98_25

Not on your lists

26866..28179
DNA (1314bp) protein (438aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INL6_KORVE
Uncharacterized protein {ECO:0000313|EMBL:KKN41235.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_98_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

28453..28971
DNA (519bp) protein (173aa)
GCN5-related N-acetyltransferase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
yjgM; GNAT family acetyltransferase
Tax=GWA2_Rokubacteria_73_35_curated
PLM3-1_170_b1_sep16_scaffold_98_27
RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29045..30286
DNA (1242bp) protein (414aa)
Glucose/sorbosone dehydrogenase Tax=uncultured candidate division OP1 bacterium RepID=H5SRL5_9BACT
glucose/sorbosone dehydrogenase
Tax=RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated
PLM3-1_170_b1_sep16_scaffold_98_28
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30108..31214)
DNA (1107bp) protein (369aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000365EDA1
Uncharacterized protein {ECO:0000313|EMBL:KGB81441.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
membrane protein
PLM3-1_170_b1_sep16_scaffold_98_29
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

31516..32529
DNA (1014bp) protein (338aa)
Dihydrodipicolinate reductase Tax=Roseiflexus sp. (strain RS-1) RepID=A5UY21_ROSS1
dihydrodipicolinate reductase
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
Displaying items 1-30 of 34 in total

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