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PLM3-1_170_b1_sep16_scaffold_206

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_206_1
Paenibacillus sp. FSL R5-192, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1..213)
DNA (213bp) protein (71aa)
hypothetical protein Tax=Paenibacillus sp. PAMC 26794 RepID=UPI00037AB167
Uncharacterized protein {ECO:0000313|EMBL:ETT37235.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-192.;"
PLM3-1_170_b1_sep16_scaffold_206_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(246..1490)
DNA (1245bp) protein (415aa)
Putative uncharacterized protein Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F380_ACIC5
Mg-chelatase subunit ChlD {ECO:0000313|EMBL:CDM65565.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_206_3
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(1528..1833)
DNA (306bp) protein (102aa)
Uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b1_sep16_scaffold_206_4
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1880..3790)
DNA (1911bp) protein (637aa)
ATP-dependent zinc metalloprotease FtsH Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVN1_KORVE
FtsH peptidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM3-1_170_b1_sep16_scaffold_206_5
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(3833..4426)
DNA (594bp) protein (198aa)
Phosphoribosyltransferase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVN2_KORVE
phosphoribosyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_206_6
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(4423..5889)
DNA (1467bp) protein (489aa)
tRNA(Ile)-lysidine synthetase-like protein; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
tRNA(Ile)-lysidine synthetase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_206_7
unknown

Not on your lists

comp(5996..6403)
DNA (408bp) protein (136aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_206_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(6400..7098)
DNA (699bp) protein (233aa)
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_206_trna_1
unknown

Not on your lists

7747..7818
DNA (72bp)
transferRNA Met
PLM3-1_170_b1_sep16_scaffold_206_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8462..9145
DNA (684bp) protein (228aa)
Glycine cleavage H-protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITM8_KORVE
glycine cleavage H-protein
Glycine cleavage H-protein {ECO:0000313|EMBL:ABF39772.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_206_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

9427..10191
DNA (765bp) protein (255aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YU7_SOLUE
4Fe-4S ferredoxin
4Fe-4S ferredoxin, iron-sulfur binding domain protein {ECO:0000313|EMBL:ABJ85168.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b1_sep16_scaffold_206_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

10188..11360
DNA (1173bp) protein (391aa)
Polysulphide reductase, NrfD Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YU6_SOLUE
polysulfide reductase NrfD
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_206_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

11364..13046
DNA (1683bp) protein (561aa)
Integral membrane sensor signal transduction histidine kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YU5_SOLUE
integral membrane sensor signal transduction histidine kinase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_206_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13039..14394
DNA (1356bp) protein (452aa)
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INE5_KORVE
Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABF41605.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_206_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14406..14936
DNA (531bp) protein (177aa)
Peptidase, zinc-dependent Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INE4_KORVE
peptidase, zinc-dependent
Peptidase, zinc-dependent {ECO:0000313|EMBL:ABF41606.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_206_15
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

15563..16465
DNA (903bp) protein (301aa)
Transcription regulator Tax=Patulibacter medicamentivorans RepID=H0EBH8_9ACTN
Transcription regulator {ECO:0000313|EMBL:EHN08959.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
diacylglycerol kinase
PLM3-1_170_b1_sep16_scaffold_206_16
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(16489..16848)
DNA (360bp) protein (120aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VH4_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3-1_170_b1_sep16_scaffold_206_17
unknown

Not on your lists

comp(16845..17177)
DNA (333bp) protein (111aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_206_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(17287..17520)
DNA (234bp) protein (78aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036C2DA4
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_206_19
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

17644..18126
DNA (483bp) protein (161aa)
NUDIX hydrolase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRZ8_KORVE
NUDIX hydrolase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_206_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18231..18968)
DNA (738bp) protein (246aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88544.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3-1_170_b1_sep16_scaffold_206_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(19013..19756)
DNA (744bp) protein (248aa)
undecaprenyl pyrophosphate synthase (EC:2.5.1.31)
Isoprenyl transferase Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7KN90_METC4
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3-1_170_b1_sep16_scaffold_206_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19815..20207)
DNA (393bp) protein (131aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037E491F
transcriptional regulator
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM3-1_170_b1_sep16_scaffold_206_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(20213..20824)
DNA (612bp) protein (204aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037DB688
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_206_24
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(20880..21623)
DNA (744bp) protein (248aa)
Glycosyl transferase, family 2 Tax=mine drainage metagenome RepID=E6PYD8_9ZZZZ
glycosyl transferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3-1_170_b1_sep16_scaffold_206_25
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(21626..22333)
DNA (708bp) protein (236aa)
pcm; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase bin=GWC2_Proteo_65_14_Ab886 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_206_26
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(22385..23572)
DNA (1188bp) protein (396aa)
Kynureninase {ECO:0000313|EMBL:CDM66962.1}; EC=3.7.1.3 {ECO:0000313|EMBL:CDM66962.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
kynureninase (EC:3.7.1.3)
Kynureninase bin=GWA2_Ignavibacteria_55_11 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
PLM3-1_170_b1_sep16_scaffold_206_27
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23565..24998)
DNA (1434bp) protein (478aa)
Amino acid permease Tax=Brevibacillus panacihumi W25 RepID=V6MD91_9BACL
Amino acid permease {ECO:0000313|EMBL:EST53353.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
amino acid permease-associated protein
PLM3-1_170_b1_sep16_scaffold_206_28
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

25086..25844
DNA (759bp) protein (253aa)
membrane protein; K07090 bin=bin1_lowGC species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
protein of unknown function DUF81
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_206_29
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(25894..27768)
DNA (1875bp) protein (625aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INS5_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41475.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Displaying 30 items

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