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PLM3-1_170_b1_sep16_scaffold_212

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_212_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3..524
DNA (522bp) protein (174aa)
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:CDM64330.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB bin=CNBR_ACIDO species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Heavy metal efflux pump, CzcB family
PLM3-1_170_b1_sep16_scaffold_212_2
unknown

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comp(995..1285)
DNA (291bp) protein (97aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_212_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(2006..4273)
DNA (2268bp) protein (756aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037F2EBC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_212_4
unknown

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4489..5256
DNA (768bp) protein (256aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_212_trna_1
unknown

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comp(5719..5790)
DNA (72bp)
transferRNA Glu
PLM3-1_170_b1_sep16_scaffold_212_5
unknown

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comp(5915..6154)
DNA (240bp) protein (80aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_212_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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6415..6822
DNA (408bp) protein (136aa)
7-cyano-7-deazaguanine reductase; K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
7-cyano-7-deazaguanine reductase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_212_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

6897..7754
DNA (858bp) protein (286aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP08_KORVE
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_212_8
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

7879..8901
DNA (1023bp) protein (341aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKN8_KORVE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_212_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(8957..11413)
DNA (2457bp) protein (819aa)
hypothetical protein Tax=Atribacteria bacterium JGI 0000059-I14 RepID=UPI000363BA51
ATP-dependent protease
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_212_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

11589..12836
DNA (1248bp) protein (416aa)
Arabinose efflux permease Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEY7_CHLTF
arabinose efflux permease
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_212_11
unknown

Not on your lists

12892..13047
DNA (156bp) protein (52aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000365764D
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_212_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(13050..13427)
DNA (378bp) protein (126aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035C32F3
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_212_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(13450..14661)
DNA (1212bp) protein (404aa)
hypothetical protein Tax=unclassified candidate division EM 19 RepID=UPI00036BC372
serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_212_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

14929..16800
DNA (1872bp) protein (624aa)
tktA; transketolase (EC:2.2.1.1)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000372CAC8
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_212_15
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16920..17765)
DNA (846bp) protein (282aa)
Fatty acid desaturase protein Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TXW7_9DELT
Fatty acid desaturase protein {ECO:0000313|EMBL:ERK90399.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
fatty acid desaturase
PLM3-1_170_b1_sep16_scaffold_212_16
Dehalococcoides sp. UCH007, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

18087..20108
DNA (2022bp) protein (674aa)
Signal transduction histidine kinase, nitrogen specific, NtrB Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXN7_ROSS1
chemotaxis protein CheY
RdhCD protein {ECO:0000313|EMBL:BAQ35349.1}; species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides sp. UCH007.;"
PLM3-1_170_b1_sep16_scaffold_212_17
unknown

Not on your lists

20178..20453
DNA (276bp) protein (92aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_212_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(20535..20960)
DNA (426bp) protein (142aa)
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_212_19
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(21132..23048)
DNA (1917bp) protein (639aa)
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CZ7_SOLUE
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3-1_170_b1_sep16_scaffold_212_20
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

23238..24515
DNA (1278bp) protein (426aa)
Fibronectin, type III Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRN8_KORVE
fibronectin type III
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_212_21
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

24564..25604
DNA (1041bp) protein (347aa)
Cell shape determining protein MreB Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F7D1_ACIC5
rod shape-determining protein MreB
Cell shape determining protein MreB {ECO:0000313|EMBL:ACO34271.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
PLM3-1_170_b1_sep16_scaffold_212_22
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

25640..26524
DNA (885bp) protein (295aa)
Rod shape-determining protein MreC Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRN6_KORVE
rod shape-determining protein MreC
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_212_23
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

26526..27089
DNA (564bp) protein (188aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRN5_KORVE
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_212_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

27050..27712
DNA (663bp) protein (221aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92235.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3-1_170_b1_sep16_scaffold_212_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

27754..28143
DNA (390bp) protein (130aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92235.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 26 items

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