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PLM3-1_170_b1_sep16_scaffold_419

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_419_1
unknown

Not on your lists

comp(3..239)
DNA (237bp) protein (79aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_419_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(236..628)
DNA (393bp) protein (131aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:CDM65929.1}; EC=4.1.1.36 {ECO:0000313|EMBL:CDM65929.1};; EC=6.3.2.5 {ECO:0000313|EMBL:CDM65929.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Phosphopantothenylcysteine decarboxylase and phosphopantothenate--cysteine ligase Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5E9E3_GEOBB
coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
PLM3-1_170_b1_sep16_scaffold_419_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(573..1379)
DNA (807bp) protein (269aa)
Phosphopantothenoylcysteine decarboxylase / Phosphopantothenate-cysteine ligase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK24_KORVE
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_419_4
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(1390..1614)
DNA (225bp) protein (75aa)
DNA-directed RNA polymerase subunit omega Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PLJ1_9FIRM
DNA-directed RNA polymerase subunit omega
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3-1_170_b1_sep16_scaffold_419_5
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1619..2248)
DNA (630bp) protein (210aa)
guanylate kinase Tax=Halomonas smyrnensis RepID=UPI0002DCE6F1
guanylate kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3-1_170_b1_sep16_scaffold_419_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(2251..3165)
DNA (915bp) protein (305aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK20_KORVE
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_419_7
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(3162..4991)
DNA (1830bp) protein (610aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037A0C05
ABC transporter-like protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_419_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(5071..5946)
DNA (876bp) protein (292aa)
UPF0042 nucleotide-binding protein Acid345_3782 Tax=Koribacter versatilis (strain Ellin345) RepID=Y3782_KORVE
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_419_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(5959..7416)
DNA (1458bp) protein (486aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037A7786
RNA polymerase sigma 54 subunit RpoN
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_419_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(7452..8177)
DNA (726bp) protein (242aa)
ABC transporter Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000378FB2C
ABC transporter-like protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_419_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(8184..10502)
DNA (2319bp) protein (773aa)
OstA-like protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR39_KORVE
OstA-like protein
OstA-like protein {ECO:0000313|EMBL:ABF40661.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_419_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(10602..12485)
DNA (1884bp) protein (628aa)
Aldehyde dehydrogenase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C22_SOLUE
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:CDM66489.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
aldehyde dehydrogenase
PLM3-1_170_b1_sep16_scaffold_419_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(12542..12823)
DNA (282bp) protein (94aa)
microcompartments protein bin=CNBR_ACIDO species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
microcompartments protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_419_14
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(12952..14049)
DNA (1098bp) protein (366aa)
Diguanylate cyclase with GAF sensor Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKE0_KORVE
GAF sensor-containing diguanylate cyclase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_419_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

14239..15024
DNA (786bp) protein (262aa)
transcriptional regulator bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3-1_170_b1_sep16_scaffold_419_16
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

15032..15982
DNA (951bp) protein (317aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP61_KORVE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3-1_170_b1_sep16_scaffold_419_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(15995..17473)
DNA (1479bp) protein (493aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.31 {ECO:0000256|HAMAP-Rule:MF_01281};; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
5-methylthioadenosine/S-adenosylhomocysteine deaminase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VX7_SOLUE
amidohydrolase
PLM3-1_170_b1_sep16_scaffold_419_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(17546..17938)
DNA (393bp) protein (131aa)
Cytidine deaminase {ECO:0000313|EMBL:CDM65507.1}; EC=3.5.4.5 {ECO:0000313|EMBL:CDM65507.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
cytidine deaminase (EC:3.5.4.5)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003667112
PLM3-1_170_b1_sep16_scaffold_419_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(17948..18811)
DNA (864bp) protein (288aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Purine nucleoside phosphorylase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM44_KORVE
purine nucleoside phosphorylase I
PLM3-1_170_b1_sep16_scaffold_419_20
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(18808..20049)
DNA (1242bp) protein (414aa)
nucleoside transporter NupC Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037AFC63
Na+ dependent nucleoside transporter
Na+ dependent nucleoside transporter {ECO:0000313|EMBL:ABF42057.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_419_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(20100..21440)
DNA (1341bp) protein (447aa)
Thymidine phosphorylase {ECO:0000313|EMBL:CDM65503.1}; EC=2.4.2.4 {ECO:0000313|EMBL:CDM65503.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Pyrimidine-nucleoside phosphorylase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8T6_SINAD
pyrimidine-nucleoside phosphorylase
Displaying 21 items

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