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PLM3-1_170_b1_sep16_scaffold_470

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_470_1
unknown

Not on your lists

2..139
DNA (138bp) protein (46aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_470_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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382..738
DNA (357bp) protein (119aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021J9_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84390.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b1_sep16_scaffold_470_3
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

869..1909
DNA (1041bp) protein (347aa)
nagA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
N-acetylglucosamine-6-phosphate deacetylase Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F490_ACIC5
PLM3-1_170_b1_sep16_scaffold_470_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1906..2145)
DNA (240bp) protein (80aa)
Glutaredoxin-like protein {ECO:0000313|EMBL:CDM65727.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Glutaredoxin-like protein protein, YruB bin=GWB2_Deltaproteobacteria_65_81 species=Deinococcus peraridilitoris genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
glutaredoxin
PLM3-1_170_b1_sep16_scaffold_470_5
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(2223..2669)
DNA (447bp) protein (149aa)
ATP synthase epsilon chain Tax=Koribacter versatilis (strain Ellin345) RepID=ATPE_KORVE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_470_6
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(2697..4160)
DNA (1464bp) protein (488aa)
ATP synthase F0F1 subunit beta (EC:3.6.3.14)
ATP synthase subunit beta Tax=Solibacter usitatus (strain Ellin6076) RepID=ATPB_SOLUE
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_470_7
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(4169..5041)
DNA (873bp) protein (291aa)
ATP synthase F1 subunit gamma (EC:3.6.3.15)
ATP synthase gamma chain Tax=Solibacter usitatus (strain Ellin6076) RepID=ATPG_SOLUE
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_470_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(5061..6599)
DNA (1539bp) protein (513aa)
ATP synthase F0F1 subunit alpha (EC:3.6.3.15)
ATP synthase subunit alpha Tax=Solibacter usitatus (strain Ellin6076) RepID=ATPA_SOLUE
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_470_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(6609..7145)
DNA (537bp) protein (179aa)
ATP synthase subunit delta Tax=Solibacter usitatus (strain Ellin6076) RepID=ATPD_SOLUE
ATP synthase F1 subunit delta
ATP synthase subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000255|HAMAP-Rule:MF_01416}; Short=F-ATPase subunit delta {ECO:0000255|HAMAP-Rule:MF_01416};; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b1_sep16_scaffold_470_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(7142..7729)
DNA (588bp) protein (196aa)
F0F1-type ATP synthase subunit b (EC:3.6.3.14)
ATP synthase subunit b Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ91_CHLTF
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_470_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(7726..8199)
DNA (474bp) protein (158aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037B9B00
H+-transporting two-sector ATPase subunit B/B'
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_470_12
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8535..9707
DNA (1173bp) protein (391aa)
gcdH; glutaryl-CoA dehydrogenase (EC:1.3.8.6)
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:ACO33458.1}; EC=1.3.8.6 {ECO:0000313|EMBL:ACO33458.1};; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
Glutaryl-CoA dehydrogenase Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F8P7_ACIC5
PLM3-1_170_b1_sep16_scaffold_470_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

9752..10993
DNA (1242bp) protein (414aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000379CD24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ87242.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b1_sep16_scaffold_470_14
unknown

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11088..11702
DNA (615bp) protein (205aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_470_15
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

11815..12801
DNA (987bp) protein (329aa)
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11); K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_470_16
unknown

Not on your lists

12911..13480
DNA (570bp) protein (190aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_470_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13577..14221)
DNA (645bp) protein (215aa)
Transcriptional regulator, XRE family Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRT4_KORVE
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABF40416.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_470_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

14475..15098
DNA (624bp) protein (208aa)
Metal dependent phosphohydrolase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRT6_KORVE
metal dependent phosphohydrolase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_470_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

15203..15877
DNA (675bp) protein (225aa)
Uncharacterized protein Tax=Synechocystis sp. PCC 7509 RepID=L8KWA8_9SYNC
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3-1_170_b1_sep16_scaffold_470_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

16424..17683
DNA (1260bp) protein (420aa)
gcpE; 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] bin=CNBR_ACIDO species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_470_21
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

17680..17985
DNA (306bp) protein (102aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T5F0_THEA1
glutamyl-tRNA(Gln) amidotransferase, C subunit
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_470_22
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

17982..19436
DNA (1455bp) protein (485aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A55_SOLUE
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_470_23
Bacillus aryabhattai, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19446..19964
DNA (519bp) protein (173aa)
Uncharacterized protein Tax=Bacillus megaterium (strain DSM 319) RepID=D5D9I2_BACMD
Uncharacterized protein {ECO:0000313|EMBL:KJL04932.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus aryabhattai B8W22.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_470_24
unknown

Not on your lists

20173..20391
DNA (219bp) protein (73aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_470_25
unknown

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comp(20473..20667)
DNA (195bp) protein (65aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_470_26
unknown

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comp(20664..21017)
DNA (354bp) protein (118aa)

This feature has no annotations

Displaying 26 items

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