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PLM3-1_170_b1_sep16_scaffold_658

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_658_1
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(20..1321)
DNA (1302bp) protein (434aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Methylobacterium sp. GXF4 genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_658_2
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

1368..2984
DNA (1617bp) protein (539aa)
Glycosyl transferase, family 2 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMJ5_KORVE
glycosyl transferase family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3-1_170_b1_sep16_scaffold_658_3
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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3021..3371
DNA (351bp) protein (117aa)
Cupin domain-containing protein Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KB75_9FIRM
cupin domain-containing protein
Cupin domain-containing protein {ECO:0000313|EMBL:AGL00428.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
PLM3-1_170_b1_sep16_scaffold_658_4
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

3468..4829
DNA (1362bp) protein (454aa)
Aminopeptidase P Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILM5_KORVE
aminopeptidase P
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_658_5
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

4994..5554
DNA (561bp) protein (187aa)
Elongation factor P Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=EFP_ACIC5
efp; translation elongation factor P
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_658_6
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(5601..6593)
DNA (993bp) protein (331aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3-1_170_b1_sep16_scaffold_658_7
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(6728..8038)
DNA (1311bp) protein (437aa)
Adenylosuccinate lyase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IME7_KORVE
adenylosuccinate lyase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3-1_170_b1_sep16_scaffold_658_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

8282..8881
DNA (600bp) protein (200aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QB2_SOLUE
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABJ88158.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b1_sep16_scaffold_658_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

8878..9663
DNA (786bp) protein (262aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QB3_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88157.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b1_sep16_scaffold_658_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

9682..11058
DNA (1377bp) protein (459aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QB4_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_658_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

11069..12172
DNA (1104bp) protein (368aa)
PBS lyase HEAT domain protein repeat-containing protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QB5_SOLUE
PBS lyase
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:ABJ88155.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b1_sep16_scaffold_658_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

12276..14342
DNA (2067bp) protein (689aa)
Peptidase family M49 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJ50_SINAD
Peptidase family M49
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_658_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14375..15133)
DNA (759bp) protein (253aa)
Beta-lactamase-like protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIH4_KORVE
beta-lactamase-like protein
Beta-lactamase-like protein {ECO:0000313|EMBL:ABF43326.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_658_14
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(15306..16616)
DNA (1311bp) protein (437aa)
Peptidase M16 domain protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QF8_SOLUE
peptidase M16 domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_658_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(16653..17222)
DNA (570bp) protein (190aa)
Cysteine dioxygenase type I Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IN62_KORVE
cysteine dioxygenase type I
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_658_16
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

17347..18351
DNA (1005bp) protein (335aa)
Probable dual-specificity RNA methyltransferase RlmN Tax=Solibacter usitatus (strain Ellin6076) RepID=RLMN_SOLUE
radical SAM protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3-1_170_b1_sep16_scaffold_658_17
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(18348..19181)
DNA (834bp) protein (278aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ47_KORVE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_658_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

19490..19867
DNA (378bp) protein (126aa)
Holo-[acyl-carrier-protein] synthase Tax=Solibacter usitatus (strain Ellin6076) RepID=ACPS_SOLUE
acpS; 4'-phosphopantetheinyl transferase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_658_19
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(19874..21256)
DNA (1383bp) protein (461aa)
MiaB-like tRNA modifying enzyme Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISD7_KORVE
MiaB-like tRNA modifying enzyme
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Displaying 19 items

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