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PLM3-1_170_b1_sep16_scaffold_720

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_720_1
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

87..335
DNA (249bp) protein (83aa)
Putative Regulator protein, AsnC family Tax=Candidatus Nitrospira defluvii RepID=D8PFD6_9BACT
putative AsnC family regulatory protein (fragment)
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_720_2
GWA2_Elusimicrobia_61_42_curated, Elusimicrobia, Bacteria

Not on your lists

comp(359..1090)
DNA (732bp) protein (244aa)
Methyltransferase type 12 bin=GWA2_Elusi_like_61_42 species=Desulfovibrio salexigens genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
hypothetical protein
Tax=GWA2_Elusimicrobia_61_42_curated
PLM3-1_170_b1_sep16_scaffold_720_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(1087..2178)
DNA (1092bp) protein (364aa)
Glycosyl transferase group 1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XSL6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_720_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(2175..2966)
DNA (792bp) protein (264aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036CEF28
glycosyl transferase family protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_720_5
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(3009..3548)
DNA (540bp) protein (180aa)
signal peptide protein Tax=Nonomuraea coxensis RepID=UPI00036CB405
sigma-54 dependent transcription regulator
Tax=RBG_13_OP8X_37_8_curated
PLM3-1_170_b1_sep16_scaffold_720_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(3625..4575)
DNA (951bp) protein (317aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP65_KORVE
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_720_7
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

comp(4651..4956)
DNA (306bp) protein (102aa)
hypothetical protein bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_13_Aminicenantes_63_10_curated
PLM3-1_170_b1_sep16_scaffold_720_8
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

5152..5400
DNA (249bp) protein (83aa)
Divalent metal cation transporter MntH Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWB1_OPITP
Mn2+/Fe2+ transporter
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM3-1_170_b1_sep16_scaffold_720_9
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

5397..6473
DNA (1077bp) protein (359aa)
Oxidoreductase Tax=uncultured candidate division OP1 bacterium RepID=H5SSK7_9BACT
copper oxidase
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3-1_170_b1_sep16_scaffold_720_10
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

6477..7676
DNA (1200bp) protein (400aa)
Putative metal cation transporter bin=GWB1_Spirochaetes_59_5 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
putative metal cation transporter
Tax=RBG_16_Chloroflexi_51_16_curated
PLM3-1_170_b1_sep16_scaffold_720_11
Brevibacillus laterosporus, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7956..9314
DNA (1359bp) protein (453aa)
manganese transporter Tax=Brevibacillus laterosporus RepID=UPI000360ADE4
mntH_1; divalent metal cation transporter MntH
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus laterosporus GI-9.;"
PLM3-1_170_b1_sep16_scaffold_720_12
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

9408..9884
DNA (477bp) protein (159aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036193A5
cytochrome c class I
Tax=RBG_16_RIF03_38_11_curated
PLM3-1_170_b1_sep16_scaffold_720_13
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(9892..10353)
DNA (462bp) protein (154aa)
Putative thioredoxin peroxidase Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AQK3_9BACT
peroxiredoxin
Tax=RBG_16_Zixibacteria_43_9_curated
PLM3-1_170_b1_sep16_scaffold_720_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

10491..10874
DNA (384bp) protein (128aa)
hypothetical protein bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
amino acid-binding ACT domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_720_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

10878..11501
DNA (624bp) protein (208aa)
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_720_16
unknown

Not on your lists

11511..11753
DNA (243bp) protein (81aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_720_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11824..12018)
DNA (195bp) protein (65aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7U6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03390.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3-1_170_b1_sep16_scaffold_720_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12052..12324)
DNA (273bp) protein (91aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7U6_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03390.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3-1_170_b1_sep16_scaffold_720_19
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(12479..14239)
DNA (1761bp) protein (587aa)
pckG; phosphoenolpyruvate carboxykinase [GTP] (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000313|EMBL:CBE70011.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Phosphoenolpyruvate carboxykinase [GTP] Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLV4_9BACT
PLM3-1_170_b1_sep16_scaffold_720_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

14581..15180
DNA (600bp) protein (200aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XV7_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85508.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b1_sep16_scaffold_720_21
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

15239..15499
DNA (261bp) protein (87aa)
Putative uncharacterized protein Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3T0_ACIC5
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_720_22
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(15503..16402)
DNA (900bp) protein (300aa)
Patatin Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INT2_KORVE
patatin
Patatin {ECO:0000313|EMBL:ABF41468.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_720_23
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16525..17190
DNA (666bp) protein (222aa)
3-hydroxyacyl-CoA dehydrogenase (Fragment) Tax=Pontibacter sp. BAB1700 RepID=J1FDE5_9BACT
3-hydroxyacyl-CoA dehydrogenase, NAD-binding
Tax=RBG_16_Gammaproteobacteria_66_13_curated
PLM3-1_170_b1_sep16_scaffold_720_24
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

17184..18989
DNA (1806bp) protein (602aa)
3-hydroxyacyl-CoA dehydrogenase (EC:4.2.1.17)
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase Tax=uncultured Acidobacteria bacterium RepID=H5SH84_9BACT
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase {ECO:0000313|EMBL:BAL55520.1}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
PLM3-1_170_b1_sep16_scaffold_720_25
RHI_Planctomycetes_42_15, Planctomycetes, Bacteria

Not on your lists

19326..21176
DNA (1851bp) protein (617aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000374C5B3
hypothetical protein
Tax=RIFCSPHIGHO2_12_Planctomycetes_42_15_curated
PLM3-1_170_b1_sep16_scaffold_720_26
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(21244..21933)
DNA (690bp) protein (230aa)
hypothetical protein Tax=Paenibacillus ginsengihumi RepID=UPI0003604CC5
transcriptional regulatory protein
Tax=RBG_16_KB1_OP1_55_9_curated
PLM3-1_170_b1_sep16_scaffold_720_27
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

22038..22340
DNA (303bp) protein (101aa)
4Fe-4S ferredoxin, iron-sulfur binding protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMV0_KORVE
4Fe-4S ferredoxin
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_720_28
R_NC10_66_22, NC10, Bacteria

Not on your lists

22468..22776
DNA (309bp) protein (103aa)
Ferredoxin bin=GWD2_Deltaproteobacteria_55_8 species=Methylacidiphilum fumariolicum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
dioxygenase, ferredoxin subunit
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b1_sep16_scaffold_720_29
R_NC10_66_22, NC10, Bacteria

Not on your lists

22793..23392
DNA (600bp) protein (200aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA00_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Displaying 29 items

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