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PLM3-1_170_b1_sep16_scaffold_852

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_852_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3..1220)
DNA (1218bp) protein (406aa)
Amino acid/polyamine/organocation transporter, APC superfamily Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILG5_KORVE
amino acid transporter
Amino acid/polyamine/organocation transporter, APC superfamily {ECO:0000313|EMBL:ABF42285.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_852_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(1265..2815)
DNA (1551bp) protein (517aa)
amino acid transporter Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B54BD9
amino acid permease
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_852_3
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2812..3432)
DNA (621bp) protein (207aa)
Thiamine-phosphate synthase Tax=Koribacter versatilis (strain Ellin345) RepID=THIE_KORVE
thiamine-phosphate pyrophosphorylase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM3-1_170_b1_sep16_scaffold_852_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3472..4821)
DNA (1350bp) protein (450aa)
Acetyl-CoA carboxylase, biotin carboxylase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILG2_KORVE
acetyl-CoA carboxylase, biotin carboxylase
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:ABF42288.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_852_5
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(4847..5377)
DNA (531bp) protein (177aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000365C652
acetyl-CoA carboxylase, biotin carboxyl carrier protein
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:AFL88042.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
PLM3-1_170_b1_sep16_scaffold_852_6
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(5384..6466)
DNA (1083bp) protein (361aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037BC896
peptidase M24
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3-1_170_b1_sep16_scaffold_852_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(6522..8417)
DNA (1896bp) protein (632aa)
Type II and III secretion system protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM5_KORVE
type II and III secretion system protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_852_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(8414..8980)
DNA (567bp) protein (189aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM6_KORVE
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_852_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(8996..9631)
DNA (636bp) protein (212aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM7_KORVE
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_852_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(9640..10248)
DNA (609bp) protein (203aa)
Type IV pilus assembly protein PilN bin=GWF2_Methylomirabilis_70_14 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fimbrial assembly protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_852_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(10245..11297)
DNA (1053bp) protein (351aa)
Type IV pilus assembly protein PilM Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRM9_KORVE
type IV pilus assembly protein PilM
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_852_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(11329..11529)
DNA (201bp) protein (67aa)
Excisionase/Xis, DNA-binding protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRN0_KORVE
excisionase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_852_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(11805..13265)
DNA (1461bp) protein (487aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
3-octaprenyl-4hydroxybenzoate decarboxylase {ECO:0000313|EMBL:ABJ84912.1}; EC=4.1.1.- {ECO:0000313|EMBL:ABJ84912.1};; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
3-octaprenyl-4hydroxybenzoate decarboxylase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZK3_SOLUE
PLM3-1_170_b1_sep16_scaffold_852_trna_1
unknown

Not on your lists

13452..13522
DNA (71bp)
transferRNA Gly
PLM3-1_170_b1_sep16_scaffold_852_14
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13529..14020)
DNA (492bp) protein (164aa)
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase {ECO:0000313|EMBL:ACO32370.1}; EC=3.1.3.45 {ECO:0000313|EMBL:ACO32370.1};; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F1C4_ACIC5
PLM3-1_170_b1_sep16_scaffold_852_15
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14149..15108)
DNA (960bp) protein (320aa)
KpsF/GutQ family protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IST9_KORVE
KpsF/GutQ family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM3-1_170_b1_sep16_scaffold_852_16
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(15105..15884)
DNA (780bp) protein (260aa)
3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_852_17
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(15878..17614)
DNA (1737bp) protein (579aa)
CTP synthase Tax=Koribacter versatilis (strain Ellin345) RepID=PYRG_KORVE
pyrG; CTP synthetase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_852_18
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

18229..18417
DNA (189bp) protein (63aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISG6_KORVE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Displaying 19 items

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