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PLM3-1_170_b1_sep16_scaffold_930

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_930_1
unknown

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1..366
DNA (366bp) protein (122aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_930_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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398..1219
DNA (822bp) protein (274aa)
ABC transporter, ATPase subunit Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHB8_KORVE
ABC transporter ATPase
ABC transporter, ATPase subunit {ECO:0000313|EMBL:ABF43732.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_930_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

1344..2099
DNA (756bp) protein (252aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A11_SOLUE
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_930_4
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

2113..3240
DNA (1128bp) protein (376aa)
tRNA-guanine transglycosylase Tax=mine drainage metagenome RepID=E6QMU3_9ZZZZ
queuine tRNA-ribosyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3-1_170_b1_sep16_scaffold_930_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

3366..3686
DNA (321bp) protein (107aa)
preprotein translocase Tax=Desulfobacter curvatus RepID=UPI000363D9B5
protein translocase subunit yajC
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_930_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

3740..5365
DNA (1626bp) protein (542aa)
Protein translocase subunit SecD Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029K4_SOLUE
protein-export membrane protein SecD
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_930_7
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

5429..6679
DNA (1251bp) protein (417aa)
Protein translocase subunit SecF Tax=Koribacter versatilis (strain Ellin345) RepID=SECF_KORVE
protein translocase subunit secF
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM3-1_170_b1_sep16_scaffold_930_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

6683..7426
DNA (744bp) protein (248aa)
TonB family protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029K2_SOLUE
TonB family protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_930_9
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

7545..8267
DNA (723bp) protein (241aa)
MotA/TolQ/ExbB proton channel Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029K1_SOLUE
MotA/TolQ/ExbB proton channel
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_930_10
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

8271..8720
DNA (450bp) protein (150aa)
Outer membrane transport energization protein ExbD Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVE5_KORVE
biopolymer transport protein ExbD/TolR
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_930_11
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

8826..9254
DNA (429bp) protein (143aa)
Outer membrane transport energization protein ExbD Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVE4_KORVE
biopolymer transport protein ExbD/TolR
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_930_12
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

9359..10210
DNA (852bp) protein (284aa)
TPR repeat protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVE3_KORVE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_930_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

10732..12939
DNA (2208bp) protein (736aa)
(P)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVC0_KORVE
(p)ppGpp synthetase SpoT/RelA
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_930_14
unknown

Not on your lists

13034..13669
DNA (636bp) protein (212aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_930_15
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13715..15184
DNA (1470bp) protein (490aa)
PDZ domain protein {ECO:0000313|EMBL:EXJ15127.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp. AK35.;"
PLM3-1_170_b1_sep16_scaffold_930_16
R_Deltaproteobacteria_43_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15376..15510
DNA (135bp) protein (45aa)
Endoribonuclease L-PSP Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXH2_ROSS1
putative endoribonuclease L-PSP
Tax=RIFCSPHIGHO2_12_FULL_Deltaproteobacteria_43_9_curated
PLM3-1_170_b1_sep16_scaffold_930_17
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15536..16342)
DNA (807bp) protein (269aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000373E62D
glycoside hydrolase
Glycoside hydrolase {ECO:0000313|EMBL:AHX13452.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
PLM3-1_170_b1_sep16_scaffold_930_18
unknown

Not on your lists

comp(16488..16598)
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 18 items

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