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PLM3-1_170_b1_sep16_scaffold_933

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_933_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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3..1439
DNA (1437bp) protein (479aa)
Carboxyl transferase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028R8_SOLUE
carboxyl transferase
Carboxyl transferase {ECO:0000313|EMBL:ABJ82484.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b1_sep16_scaffold_933_2
R_RIF_OD1_06_34_10, RIF-OD1-6, Parcubacteria, Bacteria

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1531..1719
DNA (189bp) protein (63aa)
Putative uncharacterized protein bin=GWC2_OD1_43_27 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_34_10_curated
PLM3-1_170_b1_sep16_scaffold_933_3
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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1713..3290
DNA (1578bp) protein (526aa)
Pyruvate carboxylase subunit A Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVE2_KORVE
pyruvate carboxylase subunit A
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3-1_170_b1_sep16_scaffold_933_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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3287..3802
DNA (516bp) protein (172aa)
Biotin carboxyl carrier protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVE1_KORVE
biotin/lipoyl attachment
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_933_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(3860..4930)
DNA (1071bp) protein (357aa)
PpiC-type peptidyl-prolyl cis-trans isomerase bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_933_6
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(4974..5165)
DNA (192bp) protein (64aa)
50S ribosomal protein L28 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B74AC6
50S ribosomal protein L28
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3-1_170_b1_sep16_scaffold_933_trna_1
unknown

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5343..5415
DNA (73bp)
transferRNA Ala
PLM3-1_170_b1_sep16_scaffold_933_7
RLO_PLX_64_10, Bacteria

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comp(5524..6141)
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=Geobacter metallireducens RepID=Q39V25_GEOMG
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b1_sep16_scaffold_933_8
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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comp(6138..8237)
DNA (2100bp) protein (700aa)
TonB-dependent receptor bin=GWC2_Syntrophus__56_31 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
TonB-dependent receptor
Tax=RBG_13_Nitrospirae_43_8_curated
PLM3-1_170_b1_sep16_scaffold_933_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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9056..10066
DNA (1011bp) protein (337aa)
TonB-like protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILN5_KORVE
TonB-like protein
TonB-like protein {ECO:0000313|EMBL:ABF42215.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_933_10
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10081..11793
DNA (1713bp) protein (571aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000363603F
peptidase M48, Ste24p
Peptidase M48, Ste24p {ECO:0000313|EMBL:ABF42216.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_933_11
Deinococcus swuensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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11899..12201
DNA (303bp) protein (101aa)
Uncharacterized protein Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YYH0_NOCFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ45810.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus swuensis.;"
PLM3-1_170_b1_sep16_scaffold_933_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(12211..13212)
DNA (1002bp) protein (334aa)
Uncharacterized protein Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZMS7_TERRK bin=16ft_combo_ws3_JS1 species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b1_sep16_scaffold_933_13
unknown

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13415..13828
DNA (414bp) protein (138aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_933_14
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

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14226..14642
DNA (417bp) protein (139aa)
Uncharacterized protein bin=GWC2_Ignavibacteria_38_9 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
Tax=RBG_16_Armatimonadetes_58_9_curated
PLM3-1_170_b1_sep16_scaffold_933_15
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14639..15322)
DNA (684bp) protein (228aa)
Uncharacterized protein Tax=Streptomycetaceae bacterium MP113-05 RepID=V6KYS1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EST37305.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
short-chain dehydrogenase/reductase SDR
Displaying 16 items

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