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PLM3-1_170_b1_sep16_scaffold_12292

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_12292_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(301..1725)
DNA (1425bp) protein (475aa)
Uncharacterized protein Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IH61_PHYMF
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_12292_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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1865..2614
DNA (750bp) protein (250aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_12292_3

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comp(2733..3077)
DNA (345bp) protein (115aa)
Putative uncharacterized protein Tax=uncultured bacterium 92 RepID=E3T6B9_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ADC35863.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium 92.;"
PAS/PAC sensor hybrid histidine kinase
PLM3-1_170_b1_sep16_scaffold_12292_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3202..3678
DNA (477bp) protein (159aa)
Transcriptional regulatory protein Tax=Clostridium botulinum D str. 1873 RepID=C5VP21_CLOBO
transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
Transcriptional regulatory protein {ECO:0000313|EMBL:EES92404.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum D str. 1873.;"
PLM3-1_170_b1_sep16_scaffold_12292_5
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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3905..4471
DNA (567bp) protein (189aa)
Putative uncharacterized protein Tax=Marinomonas sp. (strain MWYL1) RepID=A6VVG5_MARMS
hypothetical protein
Tax=RBG_16_KB1_OP1_55_9_curated
PLM3-1_170_b1_sep16_scaffold_12292_6
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(5374..5649)
DNA (276bp) protein (92aa)
Tax=RBG_13_Bacteroidetes_42_15_curated
PLM3-1_170_b1_sep16_scaffold_12292_7
Burkholderiaceae bacterium 26, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5674..6024)
DNA (351bp) protein (117aa)
Uncharacterized protein {ECO:0000313|EMBL:KJK04629.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 26.;"
PLM3-1_170_b1_sep16_scaffold_12292_8
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6306..8030
DNA (1725bp) protein (575aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI0003645F7C
Uncharacterized protein {ECO:0000313|EMBL:KJC43918.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
protein containing ipt/tig domains (cell surface receptor)
PLM3-1_170_b1_sep16_scaffold_12292_9
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8045..9118
DNA (1074bp) protein (358aa)
Filamin-C Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SF84_ACTS5
Uncharacterized protein {ECO:0000313|EMBL:KJC43918.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
Filamin-C
PLM3-1_170_b1_sep16_scaffold_12292_10
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

9133..14046
DNA (4914bp) protein (1638aa)
Rhs family protein Tax=Cupriavidus basilensis OR16 RepID=H1S024_9BURK
Teneurin-3
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3-1_170_b1_sep16_scaffold_12292_11
unknown

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14241..14573
DNA (333bp) protein (111aa)

This feature has no annotations

Displaying 11 items

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