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PLM3-1_170_b1_sep16_scaffold_9496

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_9496_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1..1356
DNA (1356bp) protein (452aa)
protein kinase (EC:2.7.11.1)
Protein kinase Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQZ9_SORC5
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3-1_170_b1_sep16_scaffold_9496_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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comp(1525..1992)
DNA (468bp) protein (156aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_9496_3
unknown

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2125..2313
DNA (189bp) protein (63aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_9496_4
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(2468..2830)
DNA (363bp) protein (121aa)
Transcriptional regulator, Fis family bin=GWF2_Planctomycetes_50_10 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
multidrug efflux system outer membrane protein
Tax=GWF2_Planctomycetes_50_10_curated
PLM3-1_170_b1_sep16_scaffold_9496_5
RifOxyB12_full_Planctomycetes_42_10_curated, Planctomycetes, Bacteria

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comp(2803..3957)
DNA (1155bp) protein (385aa)
RND efflux system, outer membrane lipoprotein, NodT family Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RIS6_DESPD
NodT family RND efflux system, outer membrane lipoprotein
Tax=RifOxyB12_full_Planctomycetes_42_10_curated
PLM3-1_170_b1_sep16_scaffold_9496_6
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(3954..4868)
DNA (915bp) protein (305aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IQ64_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB63859.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_9496_7
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(4865..5290)
DNA (426bp) protein (142aa)
ABC transporter related protein Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SQ67_PLAL2
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADG66319.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
PLM3-1_170_b1_sep16_scaffold_9496_8
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5311..5634)
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IFZ5_BEII9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB95734.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
PLM3-1_170_b1_sep16_scaffold_9496_9
Leptospirillum ferriphilum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(5631..6002)
DNA (372bp) protein (124aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIA31773.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferriphilum YSK.;"
hypothetical protein bin=bin5_DeltaP species=unknown genus=Pseudogulbenkiania taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
PLM3-1_170_b1_sep16_scaffold_9496_10
unknown

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comp(6169..6777)
DNA (609bp) protein (203aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_9496_11
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

7209..8336
DNA (1128bp) protein (376aa)
Efflux transporter, RND family, MFP subunit Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AM27_PELPD
RND family efflux transporter MFP subunit
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3-1_170_b1_sep16_scaffold_9496_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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8336..11455
DNA (3120bp) protein (1040aa)
Acriflavin resistance protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CZP1_9BACT
Acriflavin resistance protein {ECO:0000313|EMBL:EDY20205.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
RND family efflux pump inner membrane protein
PLM3-1_170_b1_sep16_scaffold_9496_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

11452..12465
DNA (1014bp) protein (338aa)
hypothetical protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_9496_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

12435..13019
DNA (585bp) protein (195aa)
hypothetical protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_9496_15
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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comp(13027..13788)
DNA (762bp) protein (254aa)
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) Tax=Chthonomonas calidirosea T49 RepID=S0EV53_9BACT
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) {ECO:0000313|EMBL:CCW34227.1}; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
Displaying 15 items

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