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PLM3-1_170_b1_sep16_scaffold_1650

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_1650_1
unknown

Not on your lists

comp(1..234)
DNA (234bp) protein (78aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_1650_2
unknown

Not on your lists

635..1306
DNA (672bp) protein (224aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_1650_3
unknown

Not on your lists

comp(1404..1640)
DNA (237bp) protein (79aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_1650_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

2090..2320
DNA (231bp) protein (77aa)
Putative uncharacterized protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1F5_ROSS1
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_1650_5
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

2324..2695
DNA (372bp) protein (124aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034A48E7
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_1650_6
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

2908..3939
DNA (1032bp) protein (344aa)
L-threonine aldolase (EC:4.1.2.5)
L-threonine aldolase {ECO:0000313|EMBL:ADL07436.1}; EC=4.1.2.5 {ECO:0000313|EMBL:ADL07436.1};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
L-threonine aldolase Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S209_THEOJ
PLM3-1_170_b1_sep16_scaffold_1650_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

4072..5028
DNA (957bp) protein (319aa)
dehydrogenase bin=bin9_gal15 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1650_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

5123..6994
DNA (1872bp) protein (624aa)
Gamma-glutamyltransferase Tax=Serratia sp. DD3 RepID=V5C9E4_9ENTR
gamma-glutamyltranspeptidase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1650_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

7140..8108
DNA (969bp) protein (323aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TPK7_9CHLR
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding {ECO:0000313|EMBL:EFH85621.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
D-isomer specific 2-hydroxyacid dehydrogenase
PLM3-1_170_b1_sep16_scaffold_1650_10
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8135..8863
DNA (729bp) protein (243aa)
Uncharacterized protein Tax=Streptomyces niveus NCIMB 11891 RepID=V6KM23_STRNV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIS02069.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
PLM3-1_170_b1_sep16_scaffold_1650_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

8870..9472
DNA (603bp) protein (201aa)
hypothetical protein Tax=Methylobacterium sp. 77 RepID=UPI00037BEBB3
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_1650_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(9518..10018)
DNA (501bp) protein (167aa)
hypothetical protein; K09767 hypothetical protein bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
UPF0234 protein yajQ
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_1650_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

10038..10889
DNA (852bp) protein (284aa)
hypothetical protein Tax=Dyella japonica RepID=UPI000308A9E1
glutamine cyclotransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1650_14
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

11008..12156
DNA (1149bp) protein (383aa)
argE; Acetylornithine deacetylase; K01438 acetylornithine deacetylase [EC:3.5.1.16] bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
argE; Acetylornithine deacetylase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_1650_15
unknown

Not on your lists

12156..12392
DNA (237bp) protein (79aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_1650_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(12588..13556)
DNA (969bp) protein (323aa)
proline dehydrogenase; K00318 proline dehydrogenase [EC:1.5.99.8] bin=CNBR_ACIDO species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
proline dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1650_17
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(13556..14680)
DNA (1125bp) protein (375aa)
glycerol-3-phosphate acyltransferase (EC:2.3.1.15); K00631 glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] bin=CNBR_ACIDO species=Pasteurella multocida genus=Pasteurella taxon_order=Pasteurellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glycerol-3-phosphate acyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_1650_18
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(14680..15087)
DNA (408bp) protein (136aa)
id=12556708 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_1650_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

15101..16651
DNA (1551bp) protein (517aa)
Uncharacterized protein Tax=Sulfobacillus acidophilus RepID=F8I8G2_SULAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1650_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

16743..18629
DNA (1887bp) protein (629aa)
tktA; transketolase (EC:2.2.1.1)
Transketolase Tax=Candidatus Nitrospira defluvii RepID=D8PG58_9BACT
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_1650_21
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18796..20835
DNA (2040bp) protein (680aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035EFF67
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3-1_170_b1_sep16_scaffold_1650_22
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

20993..22135
DNA (1143bp) protein (381aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2F9_CALAS
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1650_23
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

22271..22711
DNA (441bp) protein (147aa)
Cobalamin B12-binding domain protein bin=GWA2_Methylomirabilis_73_35 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cobalamin B12-binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_1650_24
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

22761..24257
DNA (1497bp) protein (499aa)
phenylacetate--CoA ligase (EC:6.2.1.30)
Phenylacetate--CoA ligase bin=GWF2_Methylomirabilis_70_14 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3-1_170_b1_sep16_scaffold_1650_25
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

24350..26032
DNA (1683bp) protein (561aa)
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase bin=GWF2_Methylomirabilis_70_14 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM3-1_170_b1_sep16_scaffold_1650_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

26047..26985
DNA (939bp) protein (313aa)
Beta-lactamase domain protein Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJ72_RHOMR
beta-lactamase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1650_27
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(27142..27531)
DNA (390bp) protein (130aa)
HEPN domain protein bin=GWD2_Nitrospirae-related_57_8 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1650_28
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(27528..27863)
DNA (336bp) protein (112aa)
DNA polymerase, beta-like region Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RI65_MOOTA
DNA polymerase, beta-like region
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1650_29
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(28006..30750)
DNA (2745bp) protein (915aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UH4_SOLUE
serine/threonine protein kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_1650_30
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(30815..31729)
DNA (915bp) protein (305aa)
id=12556705 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying items 1-30 of 31 in total

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