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PLM3-1_170_b1_sep16_scaffold_47

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_47_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..585)
DNA (585bp) protein (195aa)
hypothetical protein Tax=Methylosinus sp. LW4 RepID=UPI00037D17E1
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3-1_170_b1_sep16_scaffold_47_2
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

938..1351
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Novosphingobium sp. Rr 2-17 RepID=I9L479_9SPHN
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_47_3
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

1377..2309
DNA (933bp) protein (311aa)
Putative uncharacterized protein Tax=uncultured marine microorganism HF4000_009L19 RepID=B3T1G9_9ZZZZ
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_47_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2311..2706)
DNA (396bp) protein (132aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K7PDW6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_47_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2799..3638
DNA (840bp) protein (280aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_47_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(3656..5404)
DNA (1749bp) protein (583aa)
Uncharacterized protein Tax=Luminiphilus syltensis NOR5-1B RepID=B8KSL4_9GAMM
streptogramin lyase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_47_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(5673..6116)
DNA (444bp) protein (148aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D109_9BACT
PilT protein-like protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_47_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(6113..6367)
DNA (255bp) protein (85aa)
Prevent-host-death family protein Tax=Pedosphaera parvula Ellin514 RepID=B9XI00_9BACT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_47_trna_1
unknown

Not on your lists

comp(6501..6573)
DNA (73bp)
transferRNA Thr
PLM3-1_170_b1_sep16_scaffold_47_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

6638..7438
DNA (801bp) protein (267aa)
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] bin=CNBR_ACIDO species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
tRNA pseudouridine synthase A
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_47_10
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7494..8174)
DNA (681bp) protein (227aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR84_KORVE
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_65_10_curated
PLM3-1_170_b1_sep16_scaffold_47_11
unknown

Not on your lists

8375..8686
DNA (312bp) protein (104aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_47_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8918..9226
DNA (309bp) protein (103aa)
membrane protein Tax=Thiobacillus denitrificans RepID=UPI000372F929
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
PLM3-1_170_b1_sep16_scaffold_47_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9235..11955
DNA (2721bp) protein (907aa)
hypothetical protein; K09118 hypothetical protein bin=CNBR_ACIDO species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_47_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(12044..14512)
DNA (2469bp) protein (823aa)
Putative TonB-dependent receptor-like protein Tax=Aplysina aerophoba bacterial symbiont clone AANRPS RepID=F8S2Z2_9BACT
TonB-dependent receptor
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_47_15
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14545..15813)
DNA (1269bp) protein (423aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacterium modesticaldum (strain ATCC 51547 / Ice1).;"
Aspartokinase Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TFR7_HELMI
aspartate kinase
PLM3-1_170_b1_sep16_scaffold_47_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(15950..17206)
DNA (1257bp) protein (419aa)
thrC; threonine synthase (TS) (EC:4.2.3.1) bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
threonine synthase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_47_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(17203..18546)
DNA (1344bp) protein (448aa)
Homoserine dehydrogenase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRL7_KORVE
homoserine dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_47_18
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(18817..19836)
DNA (1020bp) protein (340aa)
ketol-acid reductoisomerase; K00053 ketol-acid reductoisomerase [EC:1.1.1.86] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86)
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_47_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(19888..20430)
DNA (543bp) protein (181aa)
Acetolactate synthase, small subunit Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILZ2_KORVE
acetolactate synthase small subunit
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM3-1_170_b1_sep16_scaffold_47_20
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(20521..22236)
DNA (1716bp) protein (572aa)
Acetolactate synthase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILZ1_KORVE
acetolactate synthase large subunit
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_47_21
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22233..23906)
DNA (1674bp) protein (558aa)
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase Tax=uncultured Acidobacteria bacterium RepID=H5SPP1_9BACT
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b1_sep16_scaffold_47_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(23961..24815)
DNA (855bp) protein (285aa)
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N035_ANATU
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM3-1_170_b1_sep16_scaffold_47_23
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(25136..26941)
DNA (1806bp) protein (602aa)
Sulfate adenylyltransferase, large subunit Tax=Pedosphaera parvula Ellin514 RepID=B9XLS3_9BACT
sulfate adenylyltransferase large subunit
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM3-1_170_b1_sep16_scaffold_47_24
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(26928..27743)
DNA (816bp) protein (272aa)
Phosphoadenosine phosphosulfate reductase Tax=Pedosphaera parvula Ellin514 RepID=B9XLS5_9BACT
sulfate adenylyltransferase subunit 2 sulfate adenylatetransferase sat ATP-sulfurylase small subunit
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM3-1_170_b1_sep16_scaffold_47_25
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(27798..28664)
DNA (867bp) protein (289aa)
Membrane protein Tax=uncultured bacterium RepID=K7PD99_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_47_26
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(28691..29452)
DNA (762bp) protein (254aa)
Putative PAPS reductase Tax=uncultured crenarchaeote RepID=Q702F7_9CREN
PAPS reductase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3-1_170_b1_sep16_scaffold_47_27
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

29814..30731
DNA (918bp) protein (306aa)
HTH-type transcriptional regulator soxR bin=CNBR_ACIDO species=Paenibacillus sp. JC66 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
LysR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_47_28
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(30828..31409)
DNA (582bp) protein (194aa)
Uncharacterized protein Tax=Serratia odorifera DSM 4582 RepID=D4E119_SEROD
hypothetical protein
Tax=RBG_13_Bathyarchaeota_38_9_curated
PLM3-1_170_b1_sep16_scaffold_47_29
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

31497..31712
DNA (216bp) protein (72aa)
Putative uncharacterized protein Tax=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) RepID=Q3JC34_NITOC
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying items 1-30 of 50 in total

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