ggKbase home page

PLM3-1_170_b1_sep16_scaffold_235

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_235_1
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(2..208)
DNA (207bp) protein (69aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_235_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

478..915
DNA (438bp) protein (146aa)
Predicted nucleotidyltransferases Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D5F8_PELTS
nucleotidyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_235_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1027..1155
DNA (129bp) protein (43aa)
Uncharacterized protein Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZB3_THEOJ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_235_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1379..4411
DNA (3033bp) protein (1011aa)
Putative Cna B-type protein Tax=uncultured Acidobacteria bacterium cosmid p2H8 RepID=B1NMD3_9BACT
TonB-dependent receptor plug
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_235_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(4523..6235)
DNA (1713bp) protein (571aa)
Gll3582 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NFE4_GLOVI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_235_6
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6758..8620
DNA (1863bp) protein (621aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036E78FA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB41083.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
PLM3-1_170_b1_sep16_scaffold_235_7
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

8749..11232
DNA (2484bp) protein (828aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01U97_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_235_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

11273..12640
DNA (1368bp) protein (456aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026P7_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_235_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

12766..14283
DNA (1518bp) protein (506aa)
Ankyrin repeat-containing protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DA78_SINAD
ankyrin repeat-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_235_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

14420..15559
DNA (1140bp) protein (380aa)
Uncharacterized conserved protein Tax=uncultured Oceanospirillales bacterium HF4000_23O15 RepID=E0XW08_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_235_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

15579..16922
DNA (1344bp) protein (448aa)
hypothetical protein Tax=Gemmata obscuriglobus RepID=UPI00016C4BCD
pyrrolo-quinoline quinone
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_235_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(16994..17827)
DNA (834bp) protein (278aa)
Haloacid dehalogenase, type II Tax=Mycobacterium sp. (strain JLS) RepID=A3PSL9_MYCSJ
haloacid dehalogenase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_235_13
unknown

Not on your lists

comp(17840..18316)
DNA (477bp) protein (159aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_235_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

18347..19972
DNA (1626bp) protein (542aa)
Tetratricopeptide TPR_2 repeat protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TF6_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_235_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

20374..23298
DNA (2925bp) protein (975aa)
TonB-dependent receptor bin=CNBR_ACIDO species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
TonB-dependent receptor
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_235_16
unknown

Not on your lists

comp(23220..23696)
DNA (477bp) protein (159aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_235_17
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(24014..26029)
DNA (2016bp) protein (672aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024N0_SOLUE
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_235_18
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

26465..26683
DNA (219bp) protein (73aa)
hypothetical protein Tax=Spirosoma panaciterrae RepID=UPI00036AD112
Cna protein B-type domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying 18 items

View Taxonomy