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PLM3-1_170_b1_sep16_scaffold_298

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_298_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1..546
DNA (546bp) protein (182aa)
nuoH; NADH-quinone oxidoreductase subunit H (NADH dehydrogenase I, chain H) (NDH-1, chain H) (EC:1.6.5.3 1.6.99.5) bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
NADH dehydrogenase (ubiquinone) subunit H
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_298_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

626..1132
DNA (507bp) protein (169aa)
NADH-ubiquinone oxidoreductase Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC2F
NADH:ubiquinone oxidoreductase subunit J
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_298_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1146..1448
DNA (303bp) protein (101aa)
NADH-quinone oxidoreductase subunit K 2 Tax=Solibacter usitatus (strain Ellin6076) RepID=NUOK2_SOLUE
NADH-ubiquinone oxidoreductase subunit 4L
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_298_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1462..2841
DNA (1380bp) protein (460aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
Strongly similar to NAD(P)H:quinone oxidoreductase chain 5 bin=GWB2_Proteobacteria_55_19 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_298_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

2841..3455
DNA (615bp) protein (205aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
Proton-translocating NADH-quinone oxidoreductase, chain L Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UN5_SOLUE
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_298_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

3463..5040
DNA (1578bp) protein (526aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
nuoM; NADH-quinone oxidoreductase subunit M (NADH dehydrogenase I, chain M) (NDH-1, chain M) (EC:1.6.5.3 1.6.99.5)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_298_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5040..6539
DNA (1500bp) protein (500aa)
proton-translocating NADH-quinone oxidoreductase, chain N (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N bin=GWC2_Geobacteraceae_55_20 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_298_8
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

6567..6800
DNA (234bp) protein (78aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI0003763345
atpI; ATP synthase subunit A' (protein I), membrane bound, F0 sector
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_170_b1_sep16_scaffold_298_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

6832..7221
DNA (390bp) protein (130aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_298_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7267..8019
DNA (753bp) protein (251aa)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI00037A800F
ATP synthase F0 subunit A
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_298_11
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

8099..8437
DNA (339bp) protein (113aa)
ATP synthase subunit C, membrane-bound, F0 sector; DCCD-binding (EC:3.6.3.14)
ATP synthase subunit C, membrane-bound, F0 sector DCCD-binding (Modular protein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKF2_9BACT
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_170_b1_sep16_scaffold_298_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8505..9317)
DNA (813bp) protein (271aa)
FOG: tpr repeat-protein Tax=uncultured Acidobacteria bacterium HF0770_27F21 RepID=E0XYS5_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_298_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(9432..12086)
DNA (2655bp) protein (885aa)
DNA methylase Tax=Nitrolancetus hollandicus Lb RepID=I4EF46_9CHLR
DNA methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_298_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12445..12663)
DNA (219bp) protein (73aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Synechococcus sp. RS9917 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_298_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12679..12858)
DNA (180bp) protein (60aa)
Gp37Gp68 family protein Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TLA7_MARTH
gp37gp68 family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_298_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12905..13126)
DNA (222bp) protein (74aa)
Hypothetical conserved protein Tax=uncultured candidate division OP1 bacterium RepID=H5ST61_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_298_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(13123..13380)
DNA (258bp) protein (86aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IRI6_9PLAN
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_298_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(13377..15731)
DNA (2355bp) protein (785aa)
Type III restriction-modification enzyme,R/helicase subunit Tax=Nitrolancetus hollandicus Lb RepID=I4EF45_9CHLR
protein of unknown function DUF433
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_298_19
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(15913..16431)
DNA (519bp) protein (173aa)
Putative uncharacterized protein Tax=uncultured marine microorganism HF4000_009L19 RepID=B3T1F1_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_298_20
unknown

Not on your lists

comp(16400..16741)
DNA (342bp) protein (114aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_298_21
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(16754..17578)
DNA (825bp) protein (275aa)
hypothetical protein Tax=Methylosinus sp. LW4 RepID=UPI0003680020
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_298_22
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

17659..17964
DNA (306bp) protein (102aa)
hypothetical protein bin=CNBR_ACIDO species=Belliella baltica genus=Belliella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_298_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

18046..18468
DNA (423bp) protein (141aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01P41_SOLUE
serine/threonine protein kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_298_24

Not on your lists

18465..20780
DNA (2316bp) protein (772aa)
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49021.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
serine/threonine protein kinase bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
serine/threonine protein kinase
PLM3-1_170_b1_sep16_scaffold_298_25
unknown

Not on your lists

comp(20974..21219)
DNA (246bp) protein (82aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_298_26
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22100..22516
DNA (417bp) protein (139aa)
Putative uncharacterized protein Tax=Achromobacter xylosoxidans AXX-A RepID=F7T026_ALCXX
Uncharacterized protein {ECO:0000313|EMBL:EGP46342.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
PLM3-1_170_b1_sep16_scaffold_298_27
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(23315..23734)
DNA (420bp) protein (140aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_298_28
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(23783..24706)
DNA (924bp) protein (308aa)
Protoheme IX farnesyltransferase Tax=Pedosphaera parvula Ellin514 RepID=B9XST7_9BACT
protoheme IX farnesyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM3-1_170_b1_sep16_scaffold_298_29
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(24703..25683)
DNA (981bp) protein (327aa)
Cytochrome oxidase assembly Tax=Pedosphaera parvula Ellin514 RepID=B9XST6_9BACT
ctaA; Heme A synthase, cytochrome oxidase biogenesis protein CtaA
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_298_30
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(25689..26468)
DNA (780bp) protein (260aa)
hypothetical protein Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B5F0A6
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying items 1-30 of 61 in total

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