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PLM3-1_170_b1_sep16_scaffold_361

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_361_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..278
DNA (276bp) protein (92aa)
UbiD-like subunit of potential (De) carboxylase bin=GWD2_Deltaproteobacteria_55_8 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ubiD_R; UbiD-like subunit of potential (de) carboxylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3-1_170_b1_sep16_scaffold_361_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

368..1315
DNA (948bp) protein (316aa)
cupin; K00450 gentisate 1,2-dioxygenase [EC:1.13.11.4] bin=bin7_NC10_sister species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
gentisate 1,2-dioxygenase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b1_sep16_scaffold_361_3
R_OD1_Kaiserbacteria_53_17, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

1346..2239
DNA (894bp) protein (298aa)
dihydrodipicolinate synthase (EC:4.3.3.7)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase Tax=Burkholderia sp. Ch1-1 RepID=I2IXC5_9BURK
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_53_17_curated
PLM3-1_170_b1_sep16_scaffold_361_4

Not on your lists

2239..3240
DNA (1002bp) protein (334aa)
Uncharacterized protein {ECO:0000313|EMBL:AKA49202.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
Uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Anaerobaculum mobile genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_361_5
unknown

Not on your lists

comp(3423..4112)
DNA (690bp) protein (230aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_361_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4282..4941
DNA (660bp) protein (220aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A05_SOLUE
ECF subfamily RNA polymerase sigma-24 factor
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3-1_170_b1_sep16_scaffold_361_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

4931..5755
DNA (825bp) protein (275aa)
serine/threonine protein kinase bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
serine/threonine protein kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_361_8
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(5701..5838)
DNA (138bp) protein (46aa)
hypothetical protein Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI00037D6BA9
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_361_9
unknown

Not on your lists

6413..6502
DNA (90bp) protein (30aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_361_10

Not on your lists

6603..7142
DNA (540bp) protein (180aa)
Protein kinase/protein beta WD-40 repeat Tax=uncultured bacterium BAC10-4 RepID=Q4JIS4_9BACT
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49021.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
serine/threonine protein kinase
PLM3-1_170_b1_sep16_scaffold_361_11

Not on your lists

comp(7510..7764)
DNA (255bp) protein (85aa)
Marine sediment metagenome DNA, contig: S01H4_L00171 {ECO:0000313|EMBL:GAG55207.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein bin=GWF2_Nitrospirae_44_13 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_361_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(7761..7961)
DNA (201bp) protein (67aa)
Putative periplasmic or secreted lipoprotein Tax=Thiorhodovibrio sp. 970 RepID=H8Z217_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3-1_170_b1_sep16_scaffold_361_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8175..8789
DNA (615bp) protein (205aa)
Protein kinase/protein beta WD-40 repeat Tax=uncultured bacterium BAC10-4 RepID=Q4JIS3_9BACT
serine/threonine protein kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_361_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9265..10860
DNA (1596bp) protein (532aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UH4_SOLUE
serine/threonine protein kinase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM3-1_170_b1_sep16_scaffold_361_15
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

10857..11408
DNA (552bp) protein (184aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TY9_SOLUE
serine/threonine protein kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3-1_170_b1_sep16_scaffold_361_16
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(11973..12896)
DNA (924bp) protein (308aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_361_17
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(12897..13865)
DNA (969bp) protein (323aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_361_18
unknown

Not on your lists

comp(13892..14200)
DNA (309bp) protein (103aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_361_19
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

14400..15293
DNA (894bp) protein (298aa)
Putative uncharacterized protein Tax=uncultured marine microorganism HF4000_009L19 RepID=B3T1F1_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_361_20
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(15300..15725)
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAP6_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_361_21
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(15745..16680)
DNA (936bp) protein (312aa)
Putative uncharacterized protein Tax=uncultured Acidobacteria bacterium A3 RepID=F8TTI9_9BACT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_361_22
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(16693..17589)
DNA (897bp) protein (299aa)
Putative uncharacterized protein Tax=uncultured Acidobacteria bacterium RepID=Q7X2Y1_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_361_23
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17807..19483)
DNA (1677bp) protein (559aa)
Lipolytic enzyme, G-D-S-L Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WP33_9ACTO
Lipolytic enzyme, G-D-S-L {ECO:0000313|EMBL:EFL28006.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_361_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(19724..20527)
DNA (804bp) protein (268aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM3-1_170_b1_sep16_scaffold_361_25
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20592..21281)
DNA (690bp) protein (230aa)
EcoKI restriction-modification system protein HsdS Tax=Cecembia lonarensis LW9 RepID=K1M192_9BACT
EcoKI restriction-modification system protein HsdS {ECO:0000313|EMBL:EKB50099.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
type I restriction-modification system specificity subunit
PLM3-1_170_b1_sep16_scaffold_361_26
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21241..21774)
DNA (534bp) protein (178aa)
type I restriction-modification system DNA methylase (EC:2.1.1.72)
Type I restriction-modification system DNA methylase bin=GWC2_Syntrophobacterales_56_13 species=Rhodopirellula baltica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM3-1_170_b1_sep16_scaffold_361_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22107..22331)
DNA (225bp) protein (75aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3-1_170_b1_sep16_scaffold_361_28
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

22612..22953
DNA (342bp) protein (114aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_361_29
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

23279..23881
DNA (603bp) protein (201aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_361_30
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(23989..25167)
DNA (1179bp) protein (393aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INP6_KORVE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying items 1-30 of 53 in total

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