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PLM3-1_170_b1_sep16_scaffold_493

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_493_1
RLO_PLX_64_10, Bacteria

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1..2511
DNA (2511bp) protein (837aa)
protein kinase/LuxR family transcriptional regulator (EC:2.7.11.1)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003736430
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b1_sep16_scaffold_493_2
unknown

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2923..3024
DNA (102bp) protein (34aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_493_3
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3070..3345)
DNA (276bp) protein (92aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036F3C9B
Putative uncharacterized protein {ECO:0000313|EMBL:EGW22921.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_493_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3416..4225)
DNA (810bp) protein (270aa)
protein of unknown function DUF4159
Uncharacterized protein {ECO:0000313|EMBL:AHG92750.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
PLM3-1_170_b1_sep16_scaffold_493_5
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4253..5917)
DNA (1665bp) protein (555aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YHS9_9DELT
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
integral membrane protein MviN
PLM3-1_170_b1_sep16_scaffold_493_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5999..6718
DNA (720bp) protein (240aa)
Nitroreductase Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKG9_RHOM4
nitroreductase
Nitroreductase {ECO:0000313|EMBL:ACY48881.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
PLM3-1_170_b1_sep16_scaffold_493_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

6835..7236
DNA (402bp) protein (134aa)
hypothetical protein Tax=Methylotenera RepID=UPI00036211B1
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_493_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7256..8107
DNA (852bp) protein (284aa)
Putative uncharacterized protein Tax=uncultured marine microorganism HF4000_009L19 RepID=B3T1F1_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_493_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(8167..8874)
DNA (708bp) protein (236aa)
adenylate cyclase (EC:4.6.1.1)
UPI0003CF982A related cluster Tax=unknown RepID=UPI0003CF982A
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_493_10
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9081..10457
DNA (1377bp) protein (459aa)
GntR family transcriptional regulator Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UF06_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:AKF86514.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
GntR family transcriptional regulator
PLM3-1_170_b1_sep16_scaffold_493_11
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10561..12834)
DNA (2274bp) protein (758aa)
hypothetical protein Tax=Flexithrix dorotheae RepID=UPI0003764751
Uncharacterized protein {ECO:0000313|EMBL:CCH53377.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_493_12
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(12880..14520)
DNA (1641bp) protein (547aa)
Uncharacterized protein Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z3Q8_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_493_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

14886..17117
DNA (2232bp) protein (744aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000382C22B
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_493_14
unknown

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comp(17099..17293)
DNA (195bp) protein (65aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_493_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(17300..17803)
DNA (504bp) protein (168aa)
Uncharacterized protein Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R716_PELHB
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_493_16
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(17818..18294)
DNA (477bp) protein (159aa)
hypothetical protein Tax=Chelatococcus sp. GW1 RepID=UPI0002D95279
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_493_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(18415..19302)
DNA (888bp) protein (296aa)
hypothetical protein Tax=Sphingobium sp. YL23 RepID=UPI00039E7CDC
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_493_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(19329..19736)
DNA (408bp) protein (136aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_493_19
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(19833..20699)
DNA (867bp) protein (289aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_493_20
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

20820..21440
DNA (621bp) protein (207aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0002E2E349
G-D-S-L family lipolytic protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_493_21
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

21459..22604
DNA (1146bp) protein (382aa)
C4-dicarboxylate transport protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QIN0_AZOSU
Na+/H+ dicarboxylate symporter
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying 21 items

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