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PLM3-1_170_b1_sep16_scaffold_778

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_778_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3..1694)
DNA (1692bp) protein (564aa)
integral membrane sensor signal transduction histidine kinase bin=RBG_19FT_COMBO_Aminicenantes_65_30 tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
integral membrane sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_778_2
unknown

Not on your lists

comp(1843..2052)
DNA (210bp) protein (70aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_778_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2598..2849
DNA (252bp) protein (84aa)
Uncharacterized protein Tax=Microcystis aeruginosa PCC 9701 RepID=I4IS33_MICAE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_778_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2839..3060
DNA (222bp) protein (74aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_778_5
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(3613..3954)
DNA (342bp) protein (114aa)
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation bin=CNBR_ACIDO species=Thioalkalivibrio sp. ALJT genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
histidine triad (HIT) protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_778_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3984..4844)
DNA (861bp) protein (287aa)
prmA; ribosomal protein L11 methyltransferase (EC:2.1.1.-); K02493 release factor glutamine methyltransferase [EC:2.1.1.-] bin=CNBR_ACIDO species=Desulfovibrio sp. FW1012B genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protein-(glutamine-N5) methyltransferase, release factor-specific
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_778_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4844..5926)
DNA (1083bp) protein (361aa)
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
prfA; peptide chain release factor 1
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_778_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(6264..6863)
DNA (600bp) protein (200aa)
molybdopterin converting factor-like protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] bin=CNBR_ACIDO species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
molybdenum cofactor biosynthesis protein MoaE
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_778_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6817..7614)
DNA (798bp) protein (266aa)
Phosphomethylpyrimidine kinase Tax=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) RepID=C4KZE1_EXISA
phosphomethylpyrimidine kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_778_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(7622..8269)
DNA (648bp) protein (216aa)
type 11 methyltransferase bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
type 11 methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_778_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8269..9708)
DNA (1440bp) protein (480aa)
Aspartate ammonia-lyase Tax=Geobacter sulfurreducens RepID=D7AF31_GEOSK
aspA; aspartate ammonia-lyase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_778_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

9732..11252
DNA (1521bp) protein (507aa)
fumarase (EC:4.2.1.2)
Hydro-lyase bin=GWA2_Ignavibacteria_55_11 species=Paenibacillus sp. oral taxon 786 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_778_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(11263..12213)
DNA (951bp) protein (317aa)
Formate dehydrogenase accessory protein Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DLC1_DESVM
formate dehydrogenase accessory protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_778_14
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

12408..12731
DNA (324bp) protein (108aa)
iron-sulfur cluster assembly accessory protein; K15724 iron-sulfur cluster insertion protein bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
iron-sulfur cluster assembly accessory protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_778_15
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

12830..13825
DNA (996bp) protein (332aa)
Ferric uptake regulator, Fur family bin=CNBR_ACIDO species=Desulfovibrio hydrothermalis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ferric uptake regulator, Fur family
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_778_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

13822..14649
DNA (828bp) protein (276aa)
PHP-like Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFX9_9BACT
phP-like protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_778_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

14727..15191
DNA (465bp) protein (155aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_778_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

15184..15408
DNA (225bp) protein (75aa)
cold-shock DNA-binding protein family; K03704 cold shock protein (beta-ribbon, CspA family) bin=CNBR_ACIDO species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cold-shock DNA-binding protein family
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_778_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

15417..16100
DNA (684bp) protein (228aa)
Haloacid dehalogenase domain protein hydrolase Tax=Chthoniobacter flavus Ellin428 RepID=B4D0I4_9BACT
hydrolase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM3-1_170_b1_sep16_scaffold_778_20
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(16205..16411)
DNA (207bp) protein (69aa)
cold-shock DNA-binding protein family; K03704 cold shock protein (beta-ribbon, CspA family) bin=CNBR_ACIDO species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cold-shock DNA-binding protein family
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_778_21
unknown

Not on your lists

comp(16501..16584)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 21 items

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