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PLM3-1_170_b1_sep16_scaffold_898

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_898_1
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..592
DNA (591bp) protein (197aa)
putative type I restriction-modification system, site-specific deoxyribonuclease (EC:3.1.21.3)
Type III restriction protein res subunit Tax=Thiocapsa marina 5811 RepID=F9UDC3_9GAMM
Type III restriction protein res subunit {ECO:0000313|EMBL:EGV17867.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
PLM3-1_170_b1_sep16_scaffold_898_2
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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597..1259
DNA (663bp) protein (221aa)
DNA repair protein RadC Tax=Thiocapsa marina 5811 RepID=F9UDC2_9GAMM
radC; DNA repair protein RadC-like protein
Tax=RBG_16_Gammaproteobacteria_51_14_curated
PLM3-1_170_b1_sep16_scaffold_898_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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comp(1404..2570)
DNA (1167bp) protein (389aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00036E75EF
NHL repeat-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM3-1_170_b1_sep16_scaffold_898_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(2633..3652)
DNA (1020bp) protein (340aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_898_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

4024..4194
DNA (171bp) protein (57aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_898_6
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(4226..5530)
DNA (1305bp) protein (435aa)
Uncharacterized protein Tax=Fibrisoma limi BUZ 3 RepID=I2GQM2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH56200.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_898_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6026..6925
DNA (900bp) protein (300aa)
Sugar phosphate isomerases/epimerases Tax=uncultured Gemmatimonadales bacterium HF0770_11C06 RepID=E7C6Y1_9BACT
sugar phosphate isomerase/epimerase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_898_8
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6941..8077
DNA (1137bp) protein (379aa)
Putative uncharacterized protein (Fragment) Tax=Ricinus communis RepID=B9T9A0_RICCO
Beta-lactamase {ECO:0000313|EMBL:KGF81655.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
beta-lactamase
PLM3-1_170_b1_sep16_scaffold_898_9
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(8168..9349)
DNA (1182bp) protein (394aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000374B8AB
beta-lactamase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_898_10
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9518..11020
DNA (1503bp) protein (501aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI000376E008
C69 family peptidase
Peptidase U62, modulator of DNA gyrase {ECO:0000313|EMBL:ABK52921.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3-1_170_b1_sep16_scaffold_898_11
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11047..12381
DNA (1335bp) protein (445aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI000364AF9D
peptidase
Peptidase {ECO:0000313|EMBL:AGP58835.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
PLM3-1_170_b1_sep16_scaffold_898_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

13094..14077
DNA (984bp) protein (328aa)
hypothetical protein Tax=Deinococcus apachensis RepID=UPI0003611C99
K+ channel protein
K+ channel, inward rectifier {ECO:0000313|EMBL:ABF42014.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3-1_170_b1_sep16_scaffold_898_13
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

14369..15022
DNA (654bp) protein (218aa)
Putative uncharacterized protein Tax=uncultured Gemmatimonadales bacterium HF4000_15H13 RepID=E7C898_9BACT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_898_14
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15125..15916)
DNA (792bp) protein (264aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XHS4_9BACT
Tax=RBG_16_Planctomycetes_64_12_curated
PLM3-1_170_b1_sep16_scaffold_898_15
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(15924..16256)
DNA (333bp) protein (111aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XHS5_9BACT
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
PLM3-1_170_b1_sep16_scaffold_898_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

16804..19548
DNA (2745bp) protein (915aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WI5_SOLUE
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABJ85980.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b1_sep16_scaffold_898_17
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

19636..20163
DNA (528bp) protein (176aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022A2_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_898_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

20190..21209
DNA (1020bp) protein (340aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022A3_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84200.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b1_sep16_scaffold_898_19
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(21216..21869)
DNA (654bp) protein (218aa)
FHA domain-containing protein bin=CNBR_ACIDO species=Dyella japonica genus=Dyella taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
transcriptional regulator domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_898_20
unknown

Not on your lists

comp(21967..22134)
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying 20 items

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