ggKbase home page

PLM3-1_170_b1_sep16_scaffold_43_5

Organism: PLM6_170_b1_sep16_Acidobacteria_62_11

near complete RP 49 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(6006..7445)

Top 3 Functional Annotations

Value Algorithm Source
response regulator in two-component regulatory system, sigma 54-dependent bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 456.0
  • Bit_score: 587
  • Evalue 8.90e-165
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 447.0
  • Bit_score: 513
  • Evalue 3.50e-143
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 453.0
  • Bit_score: 666
  • Evalue 1.60e-188

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_67_21 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1440
ATGGAAACACGATCTCCGGCGGCGTCCCGGGAAGTTGTGTCCGAGCGTTCGGTCGACCACGCCCTGGCGCGCGTCCTGATTGTCGAAGACGACGCATCCGCGCGGGCGGGACTGACGGAGCTCGTTCAGAGTTGGGGCTTCGAAACCGAGGGGGCCCGCGACGGCCAGGACGCGCTCGAGAAGCTCACCACCTTCCGGCCGAGCATCGTCCTGACAGACCTGGTGATGCCGCGGATGGACGGCCTCGAATTGCTGAAGGCCATTACCACGCAGGAAGAAGACATGACCGTCCTGATTCTCACCGCGCAGGGCACGGTTGAGACAGCGGTCGAGGCCATCCGTGTTGGCGCGTACGACTATCTGACGAAACCGGTCGATCCGCAGCGTCTCAAGATTCTGCTGGACAAAGTGATCGAGCGCCAAGAGACGCACCGTGAGGTCAAAGTATTGCGGCGTCAGCTGCGTGAGCACGGCGCGTTTGGGTCCTTGATTGGCAGCAGCCCGGCGATGCGGCGTGTCTATACGATCATCGAGCAGGCCGCGCCGACGGTGGCATCGGTGCTCGTGTCAGGGGAATCGGGAACCGGGAAGGAGCTGGTTGCGCAGACCTTGCACCAGCTCAGCCCGCGCGCCGCGTTCCCGTACGTACCCATCAACTGTGCAGCCATACCGGAGACGTTGCTCGAGAGCGAACTGTTCGGTCACGAAAAGGGAGCCTTCACGGGTGCTCTCGAGAGGCGAGCGGGGTGCTTTGAGCTGGCCGACCGCGGCACGATCTTCCTTGATGAAGTGGCTGAAATGACCTCCGCCACTCAGGCAAAGCTGTTGCGTGTGTTGCAGGAGCGCCGCTTCCGCAAGGTCGGCGGACGGCAGGAACAGACAGTCGACATTCGCATCATTGCGGCCACCAACGTCGATCCTGTGGACGCGGTCAAGAAGGGCAAGCTGCGAGATGACCTGTACTATCGTCTGAACGTGTTCGCGCTGACGCTGCCGCCCCTGCGTGAGCGGCGCGAGGACATTCCTCTGCTCATCCAGTCGTTCCTGACCGAGTTCAACGGCCGGCTCGGCAAGTCGGTGGTGGCGGTTGAGCCGGAGGTGTTGACGACATTCACCAATTACTCGTGGCCAGGCAACGTGCGCGAGCTACGCAATGTCATAGAGCGCGCGACGATCCTGACGAAAGGGGAGTTCATCGAAACCAAACATTTGCCGTCCGCGATTCTCGAGGCGGGACGCATCGAGCCGACGCAGCGCACCCTCGCGTTGGCGCCGGGGACCACGGTTGAAGAGGCTGAACGCCAGCTGATCGTGCTCACGCTCGAACACACGCGCGACAACAAGACCCGCGCGGCCGAGATTCTGGGCATCAGCCTGAAGACCCTCCACAACAAGCTGAACAAGCTCAAGCTACGCCGGGACGACGAAAACGGAGACTGA
PROTEIN sequence
Length: 480
METRSPAASREVVSERSVDHALARVLIVEDDASARAGLTELVQSWGFETEGARDGQDALEKLTTFRPSIVLTDLVMPRMDGLELLKAITTQEEDMTVLILTAQGTVETAVEAIRVGAYDYLTKPVDPQRLKILLDKVIERQETHREVKVLRRQLREHGAFGSLIGSSPAMRRVYTIIEQAAPTVASVLVSGESGTGKELVAQTLHQLSPRAAFPYVPINCAAIPETLLESELFGHEKGAFTGALERRAGCFELADRGTIFLDEVAEMTSATQAKLLRVLQERRFRKVGGRQEQTVDIRIIAATNVDPVDAVKKGKLRDDLYYRLNVFALTLPPLRERREDIPLLIQSFLTEFNGRLGKSVVAVEPEVLTTFTNYSWPGNVRELRNVIERATILTKGEFIETKHLPSAILEAGRIEPTQRTLALAPGTTVEEAERQLIVLTLEHTRDNKTRAAEILGISLKTLHNKLNKLKLRRDDENGD*