ggKbase home page

PLM3-1_170_b1_sep16_scaffold_43_8

Organism: PLM6_170_b1_sep16_Acidobacteria_62_11

near complete RP 49 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(8806..11295)

Top 3 Functional Annotations

Value Algorithm Source
surface antigen bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 38.8
  • Coverage: 842.0
  • Bit_score: 514
  • Evalue 1.30e-142
outer membrane protein/protective antigen OMA87 similarity KEGG
DB: KEGG
  • Identity: 26.7
  • Coverage: 854.0
  • Bit_score: 272
  • Evalue 2.40e-70
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 842.0
  • Bit_score: 744
  • Evalue 1.10e-211

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 2490
ATGATCGCGTCGCGCAGCGTCACCGAACACAAGCCGGATCGCACCACATTAATTTTCGACGTGAATCCAGGCGTCAGGACGCGCGTTGGGATGCTCAGGGTGGAGGCGGCGCCAATCGCTCCCGAAGCGTTGCTCGATCGTGTCGATCTCAGGCCGGACCAACCATTCGAGCCGACTGTTTTGGCGACCGCCCTCGAACGATACCGAGCAGAGCTTCAGGCCAAAGGCTACTACGAAGCCCGCGCCAATTTTCTTCCTCGATACTCGAACGACGAGGCGACCGTCGACTTGTCCATCCTCGTCGAGACCGGCCCGCCGGTCACGGTTCGCTTTGAGGGGGATTCGTTGCCGGATCGAGAGCGAGATCAGTTGGTCCCCATCGCGCGCGAGCGGTCTGTCGATGAAGATCTCCTCGAGGATTCCAAACGCCGGATCGAGAACAGATTGAAGGACGACGGCTATCGCGACGCGCGCGCCGACTATCGGCGCGTCGAAGGCGACGGCACGCTGACGGTGATCTTCACGATCGCTCGCGGGCCTCAGCATCGCCTGGCCCGCATCGACATCGTCGGGAACAATTCGGTGCCGACCGCCCAGTTGCGCGCGCGACTGCGCCTCAAGGACGGGGAGCCGTTCGTCGATTCAATCTTGTCTGCGGATGTTGCGGGTATGGCCGACCTGTACCGGCGTCAGGGATTCGCCGACGTGAAGATCGATCCGGCCGTGTTGCCTCCGGATAGCCTCGCCTCGGCCCAGCGCCTGGTCACGGCGCGTATCAGCATCTCTGAGGGTGTTCGTGCCGTCATTCGGGACCTGACGTTCACGGGCCACCTCGCGATTGCCGAGTCGACGTTGCGAGGTGTCACGGGTCTGACTGCTGGCGGTCCGTTTTACGAGCCGCAAACGGAGGCCGCGAACGACGCGCTGGCAGTCGAGTACATCAATCTCGGCTACCAAAACGTTCGCGTTGAGCGGACGATCACCTTCACGGACGATCGCCGCAGCGTCGATGTGGCCTTTCGGATCCAGGAAGATGTGCAGGTCATCGTCGATCACATCCTGGTTGTCGGCAATACCCGGACCGCCTCGAACATCATCGAGCGTGAGCTCGTCTTCAAATCAGGCGAGCCGCTCGGCGAGGAGGCCCGCCTCGAAAGCCAACGGCGGCTCGGCGCGTTGGGACTGTTCCGGCGCGTCGACATCACGCAGCTTCGCCATCCCGGTGAGGAAAGCCGGCGCGACGTGGTCGTCACCGTTCAAGAAGCGCCTGCCATGACGCTCGGATGGGGCGGCGGATTCGAAGGCGGCAGGCGCCTGCGCCGCTCCGGTGGCGGGACCGGTCCTGCCGAGGAGCGGATCGAGCTTGCCCCGCGCGGCTTTTTCGAGGTCGGCCGGAGAAATCTGTGGGGCAAGAACCGTTCGATTGACTTGTTTGCGCGTGTCAGTTTCCGGCCTCGGGGCGAAAGCACGACGCTGACCCCTACTCCGACTGACACCACAAAGACCGGTTACGGCTTCAACGAGTACCGCGTCGCGTTGAACTACCGTGAACCCAAAGTCTTCCAAACACCAGCAGACGGCCTGGTCACCGGATATGTCGAACAGGGAATCCGCTCCAGCTTCAACTTCAGTCGAAAGGGAACCCGGCTGGAAGTGGCGCGCCGCCTGACGACGATCACCAGCGTGAGCGGGCGCTACGCGCTGGACGAAACGCGCCTGTTCGACGAGCGCTACAACCCCTCAGAACAGCCGATCATCGACCGGGTATTCCCCCAATTCCGGTTGTCATCTTTTTCGTCCACCATCGTCCGTAACACACGTGACAATCCGCTCGACCCGACACGCGGGACCCTGCTCACGGTCGATGGCTCGCTGGCCGCGCGTGCACTCGGATCGCAAGTGGGATTCGTCAAGACCCTCGTGAAGGGGTTCTTCTACCGCCAGCTGCCTGAGTCAGTCCGTGTGATTTTTGCCGGCGGGGCCACGCTCGGCCTCGCCGATGGATTTCCGCGGCAAGTCCCGGTGCCTGACGGTCCGCCAGTCATGGTGGAAGATCTGCCCGCCAGCGAGCGCTTTTATGCCGGCGGGGACACCACAGTCCGAGGCTTCGCGCTCGATCGGCTCGGGACACGGGACACGCTTGACAAACTCGGCACGCTTGACAAACTCGGGTTTCCAAAGGGCGGGCACGGGCTCATCATTTTCAATGCGGAGCTGAGAGCGCCGGTCTGGCGAGCGTTCGAAGCCGTAGGGTTCCTTGATGTCGGCAATGTCTTCGCAAAGGTTGAGGGCGTCGATCTGGGCGAGCTCCGGGGCGGTGTCGGATTCGGCGTGCGCTATCGATCACCCCTCGGTCCGATCCGCGTGGATCTCGGGTTCAAGCTGTCGCGGTTCGAATTTCAAACCGGTGTGATCCGCCCGGACGGTACCGCCGAAACCAAACTGGAACCGCTCACAGCGTTGCACATCAGTCTCGGACAAGCATTCTAA
PROTEIN sequence
Length: 830
MIASRSVTEHKPDRTTLIFDVNPGVRTRVGMLRVEAAPIAPEALLDRVDLRPDQPFEPTVLATALERYRAELQAKGYYEARANFLPRYSNDEATVDLSILVETGPPVTVRFEGDSLPDRERDQLVPIARERSVDEDLLEDSKRRIENRLKDDGYRDARADYRRVEGDGTLTVIFTIARGPQHRLARIDIVGNNSVPTAQLRARLRLKDGEPFVDSILSADVAGMADLYRRQGFADVKIDPAVLPPDSLASAQRLVTARISISEGVRAVIRDLTFTGHLAIAESTLRGVTGLTAGGPFYEPQTEAANDALAVEYINLGYQNVRVERTITFTDDRRSVDVAFRIQEDVQVIVDHILVVGNTRTASNIIERELVFKSGEPLGEEARLESQRRLGALGLFRRVDITQLRHPGEESRRDVVVTVQEAPAMTLGWGGGFEGGRRLRRSGGGTGPAEERIELAPRGFFEVGRRNLWGKNRSIDLFARVSFRPRGESTTLTPTPTDTTKTGYGFNEYRVALNYREPKVFQTPADGLVTGYVEQGIRSSFNFSRKGTRLEVARRLTTITSVSGRYALDETRLFDERYNPSEQPIIDRVFPQFRLSSFSSTIVRNTRDNPLDPTRGTLLTVDGSLAARALGSQVGFVKTLVKGFFYRQLPESVRVIFAGGATLGLADGFPRQVPVPDGPPVMVEDLPASERFYAGGDTTVRGFALDRLGTRDTLDKLGTLDKLGFPKGGHGLIIFNAELRAPVWRAFEAVGFLDVGNVFAKVEGVDLGELRGGVGFGVRYRSPLGPIRVDLGFKLSRFEFQTGVIRPDGTAETKLEPLTALHISLGQAF*