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PLM3-1_170_b1_sep16_scaffold_561_5

Organism: PLM6_170_b1_sep16_Acidobacteria_62_11

near complete RP 49 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(2688..4115)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54-dependent transcriptional response regulator {ECO:0000313|EMBL:AHN97847.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium lac121.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 475.0
  • Bit_score: 689
  • Evalue 3.00e-195
Fis family two component sigma-54 specific transcriptional regulator bin=CNBR_ACIDO species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 475.0
  • Bit_score: 588
  • Evalue 5.20e-165
Fis family two component sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 466.0
  • Bit_score: 464
  • Evalue 1.90e-128

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Taxonomy

uncultured bacterium lac121 → Bacteria

Sequences

DNA sequence
Length: 1428
ATGTCTGAAAACACAGTACATCTCCTCATCGTCGAGGACGAGGAGCCGCTGCGGGTCGCCGTCGCCGAGCGTCTCAGCGAGCACGGCTTCCAGGTCGACCAGGCCGACACCGGCGAGCGCGCCCTCGAGCAGCTCGCAGATTTTGCGTACGACATCGTCATCACCGACCTTCGCCTGCCAGGCATCGACGGGACCAAAGTGATCGAAGCCGCCACTCAGCGCTACCCTGAAATCATCGGCATTGTCGTCACCGGGTATGGAACCGTGAGGGACGCCGTCGAGGCGATCAAGCGCGGCGCCGCCGATTTCGTGACCAAGCCGTTTCAGTTCGACGAGCTGATGCATGCCTTGAACACCGCGCTCGAGCAGCGCAGGCTGCGATCCGAGAACGCCTACCTTCGAGCGCAGTTGGACGAGCGCTATCGCTTCGAGGGCATCGTCGGGCGCAGCCGCGCCATGCGCGATTTGTTTCAGCTCCTCGAGACCGTTGCGGCAACCACGAGTACGATCCTGGTGACTGGCGAAACAGGAACCGGCAAGGAGATCGTCGCGCGCGCGATCCATCACAACAGCCCGCGGCGTGGGCAGCGGTTTGTCGCACTGAACTGCAGTGCGATTCCAGAGACGTTGCTCGAGGCCGAGCTGTTCGGTCACGTGCGAGGGGCGTTTACGGGCGCCATCGGCACTCGTCAGGGACGCCTCGAGCAGGCCCATCGTGGCACCCTCTTTCTCGACGAAGTTGGGACGATGAGCGCGGCGTTGCAGATGAAGTTGTTGCGCGTGCTGCAGGAGCGTGAATTCGAGCGCGTCGGCGATTCAAACACCATCAAGGTCGACGTGCGAGTCATTGCCGCCACCAACACCGATCTGCAGAAGATGGTGTCGGAGGGTCAGTTCCGTGAGGACCTGTACTACCGTTTGAACGTCATCCCGATTCAGTTGCCGCCGCTGCGGAACCGCAAGGAAGACATCCCGCTGCTCGTGCAGCACTTCCTGCAGAAGTTCGCCGCGCAACGGGCTGAACAGGTTCTGCCGTCCAATCCCCAATCCCCTGTCTCCAGCCTCCAGCCTCTTTCTGTGTCGCAACAGGCCATGCGGCGCCTGATGGCGTACCACTGGCCTGGCAACGTGCGTCAGCTCGAAAACGCGATCGAACGTGCGGTTGCGATCAGTGGCGGACGCACGCAGATCGAAGTCGCCGATTTACCTACCGAAGTGCAGAGCGCATCTGAAGTACCTGTGTCGCCAGACGTCTCACTTCCCAGCGATGGCCTTGACCTCGATGCCTACGTCGGCAATATCGAGCGCGAACTGATTTATAGAGCGCTGGAAAAGAGCGGCGGGAGGAAGGGTCAGGCCGCCAAGCTGCTCAGCCTGAAACGGACGACGCTAGTGGAGAAGCTGAAGCGGCTCGAGCGCGGGAACTGA
PROTEIN sequence
Length: 476
MSENTVHLLIVEDEEPLRVAVAERLSEHGFQVDQADTGERALEQLADFAYDIVITDLRLPGIDGTKVIEAATQRYPEIIGIVVTGYGTVRDAVEAIKRGAADFVTKPFQFDELMHALNTALEQRRLRSENAYLRAQLDERYRFEGIVGRSRAMRDLFQLLETVAATTSTILVTGETGTGKEIVARAIHHNSPRRGQRFVALNCSAIPETLLEAELFGHVRGAFTGAIGTRQGRLEQAHRGTLFLDEVGTMSAALQMKLLRVLQEREFERVGDSNTIKVDVRVIAATNTDLQKMVSEGQFREDLYYRLNVIPIQLPPLRNRKEDIPLLVQHFLQKFAAQRAEQVLPSNPQSPVSSLQPLSVSQQAMRRLMAYHWPGNVRQLENAIERAVAISGGRTQIEVADLPTEVQSASEVPVSPDVSLPSDGLDLDAYVGNIERELIYRALEKSGGRKGQAAKLLSLKRTTLVEKLKRLERGN*