ggKbase home page

PLM3-1_170_b1_sep16_scaffold_561_13

Organism: PLM6_170_b1_sep16_Acidobacteria_62_11

near complete RP 49 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: 11417..13234

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor sigB regulation protein rsbU {ECO:0000313|EMBL:AHN97855.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium lac121.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 603.0
  • Bit_score: 760
  • Evalue 1.00e-216
serine phosphatase bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 602.0
  • Bit_score: 648
  • Evalue 4.10e-183
Sigma factor sigB regulation protein rsbU similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 575.0
  • Bit_score: 404
  • Evalue 2.90e-110

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium lac121 → Bacteria

Sequences

DNA sequence
Length: 1818
ATGCAGCCGCTCGCGCCGGACGATTCCGGACCTCAAACGCTCGGGCGCGCGTCCGGGTCGCAAGTCAGCGATCACGAGCTCCTGACCGCATTGTTCGCCCTCGGACAAGAAGTCACATCAGTGCTCGACCTGGACGAGCTGCTGCACAAGATTCCCCTGCTTATCGCCCGGCTGATCGATTTCACGGCATTCGCGGTCTATCTGCTCGACGAGCAACGCGGCGAGCTCAAGATTGCGTACTCGGTCGGCTATCCCGAGCATGCGCGGGCGTACCGGCTTCGTGTGGGCGAGGGCATCGTTGGATCGGCGGTGGCGGAGGGCACCGCGCAACTCGTCAACGACGTTCGAGCGGATGCGCGCTACGTCGACATCGTCCCCGGCACGCGCGCCAAGCTCGCGGTCCCGCTGCGACGCAAACGGAAAATCATCGGCGTGCTCAACCTCCTCAGCGACAGAATCGGCCAGTTCACACCGCACGACGAAGCGATTCTGCGGCAATTTGGCGCCCACGTCGCGATCGCCCTGGAGAACGCGCGGCTGTTCGAGCTCGAGCGGAAACAGGCCGCCACGCTGGAGACGCTGGCCGAGATCGGCCGAGATTTTGCGGCCATCCTCGATCTCGATCTTCTCCTGCGCAGGCTGGCGCAGCTCATCAAGCGGGTGATCGACTATCGGACGTTCGGCATTTTCCTCCTCAAGGAAGACCCGTCCGGCCAAAGCGCAGGCGAGCTCGAGCTGAAGGTCGCGGTGCAGTACGGCGAGGCGCCCACAGTGCCAAACGTGAAGGTCGGCAGCGGACTGGTCGGGTACGCCGCCCTCCACAAAGAAATGGTCGTCGTGGATGATGTGACCAACGATCCGAGGTACATCAACATCGTCCCAGACGCTCGGTCGGAGCTGGCGGTGCCGTTGCTGCTGAAGGATCGCTGCATCGGCGTATTCGACCTCGAGAGCCCGGAACTGGCGGCGTTCGACCGGCAGCACGCCGAAATCCTTTCGCTTCTGGCGAGCCAGGCGGCGGTGGCGATCGAAAACGCGCGTCTCTACGAACGGCTGCGCGCCAACGAGGAACGGATCGTGCGCGAGGTCACCTTCGCGCAACGGGTGCAGGCGGCGCTGCTGCCGGTTGAGATGCCAGAGCGGTTGAAAGGCATGGACGTCGCGGGGCGGTTCGCCCCCGCCACAGAGCTTGGGGGTGATTTTTACGACTTGCTGATGCCCGATACAAATACGCTGGTCGTCGCTGTCGCCGACGTGTCAGGGAAAGGAGTGCCTGCCGCGCTTTACGGTGCATTTGCGAGCGAGCTCGTGCGATCCCGGACGTATCGACGGCGCTTCACGTCAGTTCGCACCAGCCCCGCCGGGGTCTTGGCGGCCATGAACACGATCCTTCATGAGCGCAACCTCGAGGAGTACTACTGCACGCTCTGTTATGCGAGCATCGATCAGAAGCGCCGTACAATGGCGATTGCGAATTCAGGCCTGCCCTATCCAGTGCGTTGCAACGCTGAGAGCTGCGAGATGCTCGAAGTGGCGGGTCTGCCGCTGGGGTTTTTTGAAGGTTCAACCTACGAGGAGCTGAGCCTCGAGCTTCGCGAAGGCGATCTGTGGGTCTTCTACACCGACGGGGTGGTCGATGCGAACGATCGGCAGGGACGCGAGTTCGGATCGGATCGCCTGATCGATCTGGTGTCTCACCTGCGGGACCAATCAGCGCAGACGATCGTCGACTCGATTTTCGACTCGGTCCGGAACTTCCGCGGCACGGCGCGGATTAATGACGACATGACTGTTGTGGCCCTGAAGATCACGGGGTGA
PROTEIN sequence
Length: 606
MQPLAPDDSGPQTLGRASGSQVSDHELLTALFALGQEVTSVLDLDELLHKIPLLIARLIDFTAFAVYLLDEQRGELKIAYSVGYPEHARAYRLRVGEGIVGSAVAEGTAQLVNDVRADARYVDIVPGTRAKLAVPLRRKRKIIGVLNLLSDRIGQFTPHDEAILRQFGAHVAIALENARLFELERKQAATLETLAEIGRDFAAILDLDLLLRRLAQLIKRVIDYRTFGIFLLKEDPSGQSAGELELKVAVQYGEAPTVPNVKVGSGLVGYAALHKEMVVVDDVTNDPRYINIVPDARSELAVPLLLKDRCIGVFDLESPELAAFDRQHAEILSLLASQAAVAIENARLYERLRANEERIVREVTFAQRVQAALLPVEMPERLKGMDVAGRFAPATELGGDFYDLLMPDTNTLVVAVADVSGKGVPAALYGAFASELVRSRTYRRRFTSVRTSPAGVLAAMNTILHERNLEEYYCTLCYASIDQKRRTMAIANSGLPYPVRCNAESCEMLEVAGLPLGFFEGSTYEELSLELREGDLWVFYTDGVVDANDRQGREFGSDRLIDLVSHLRDQSAQTIVDSIFDSVRNFRGTARINDDMTVVALKITG*