ggKbase home page

PLM3-1_170_b1_sep16_scaffold_451_14

Organism: PLM6_170_b1_sep16_Acidobacteria_62_11

near complete RP 49 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(13977..15203)

Top 3 Functional Annotations

Value Algorithm Source
deoxyribonuclease; K00599 [EC:2.1.1.-] bin=CNBR_ACIDO species=Frankia sp. BMG5.12 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 415.0
  • Bit_score: 330
  • Evalue 1.70e-87
rumA; 23S rRNA (uracil-5-)-methyltransferase (EC:2.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 430.0
  • Bit_score: 171
  • Evalue 4.80e-40
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 409.0
  • Bit_score: 386
  • Evalue 4.70e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1227
ATGCTCGCGCGGCACGAGGGGCGCGTGGTCCTCGTGCGTGGCGCCATTCCCGGTGAACGAGTGCAAGCCCGCATCGAGCGCGTCTCGCACGACGTTGCGCACGCGGTTGCCACCGACATCAAGGAGCCGCACCCCGATCGTCGCGAGCCGCCGATCGATCCTCTCTGTGGGGGCAACGCCTTTGCTCATATTGCCTATACACGTCAGCTTGCGTTGAAGGCCGAGATCGTGGCCGACGCGTTCGCGCACCTCGCACGGCTGGCGGTCCCGCGGCCGATTTCCGTTGCCGCGTCGCCGGAACGCGGCTACCGGATGCGTGCGCGGTTTCACGTGTGCGGGCGCCGGGCAGGTTTCTATCGCGAAGGCACTCACGAGCTTTGCGATCCGGCAACGAGCGGACAACTGCAGCCTGCGGGGGTCGCAGCCGTGCAGAAGATCGCGCAAGCCCTACACGGTACGGGTCCCGAGTCTGGCGATGTGCCTGGAATCGAGCTGGCGGAGAATATCGCCGGCAATGAGCGCGCGGTGCACGTCGACCTTTGTGACGAGCGTCAGGCGAATCGACTCGAGCGCGTTGGTGCTGTGGATGGCCTCACCGGGCTGAGCTGGTCACTCATGTCCGATTCGCGCACACACATCGTGGCCGGCAATCCGTACGTGCTTGATGAGCTGGATATCCTGTCGCTCGGAGTCCTCAGCGTCACACGCCTCAGACGGCACGTACGGGCCTTCTTCCAGGGAAATCGCTATCTGTTGTTGGAGTTGGTTGGGCGCGTGTTGTCGCTCGCTCCGGAAGGGCCAGTGGTTGATCTGTACGCCGGCGTAGGATTGTTCGCCGTCGCGCTCGCATCCACGCGGCGCGACGAAGTGGTCGCGGTCGAGGGCGACCCGATCAGCGCCACCGATCTCACCGCCAATGCCGCAACGTGCGTGCGGCCTTTTGCGTCGCATCACCTGTCCGTGGAGGACTTCCTGAGGCAGTCGAGCGGTCTTCCTGCTCACACTGTCGTGCTCGATCCCCCGCGAACGGGTTTGTCACGCGCCGCTGCCGCGGGCGTGTGCCACCACCACCCTCGGCGCATCGTCTACGTCTCGTGCGACGTTGCCACGCTTGCGCGTGACGTCAAGATCTTCACCGAGGGAGGCTATCGGCTGGTTCAGGTCGAGGCCTTTGATCTGTTTCCGAATACCGCCCACATCGAAACGATTGCAGTGCTCGATCGATAA
PROTEIN sequence
Length: 409
MLARHEGRVVLVRGAIPGERVQARIERVSHDVAHAVATDIKEPHPDRREPPIDPLCGGNAFAHIAYTRQLALKAEIVADAFAHLARLAVPRPISVAASPERGYRMRARFHVCGRRAGFYREGTHELCDPATSGQLQPAGVAAVQKIAQALHGTGPESGDVPGIELAENIAGNERAVHVDLCDERQANRLERVGAVDGLTGLSWSLMSDSRTHIVAGNPYVLDELDILSLGVLSVTRLRRHVRAFFQGNRYLLLELVGRVLSLAPEGPVVDLYAGVGLFAVALASTRRDEVVAVEGDPISATDLTANAATCVRPFASHHLSVEDFLRQSSGLPAHTVVLDPPRTGLSRAAAAGVCHHHPRRIVYVSCDVATLARDVKIFTEGGYRLVQVEAFDLFPNTAHIETIAVLDR*