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PLM3-1_170_b1_sep16_scaffold_451

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_451_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(2..304)
DNA (303bp) protein (101aa)
hypothetical protein Tax=Methylosinus sp. LW4 RepID=UPI0003680020
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_451_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(540..1565)
DNA (1026bp) protein (342aa)
Streptogramin lyase Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK50_RHOMR
streptogramin lyase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_451_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

1881..2588
DNA (708bp) protein (236aa)
Uncharacterized protein Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKG1_RHOM4
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_451_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2459..3349)
DNA (891bp) protein (297aa)
peptide chain release factor 2; K02836 peptide chain release factor 2 bin=CNBR_ACIDO species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptide chain release factor 2
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_451_5
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(3653..5167)
DNA (1515bp) protein (505aa)
lnt; apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
acyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_451_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5241..5942)
DNA (702bp) protein (234aa)
sporulation domain-containing protein bin=CNBR_ACIDO species=Ralstonia pickettii genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
sporulation domain protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_451_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(5957..6721)
DNA (765bp) protein (255aa)
membrane protein Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B38325
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_451_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(6718..8091)
DNA (1374bp) protein (458aa)
nodulation efficiency protein NfeD; K07403 membrane-bound serine protease (ClpP class) bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
membrane-bound serine protease (ClpP class)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_451_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(8138..9766)
DNA (1629bp) protein (543aa)
hypothetical protein bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_451_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(9815..10411)
DNA (597bp) protein (199aa)
id=12555969 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_451_11
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

10457..11095
DNA (639bp) protein (213aa)
Molybdenum cofactor guanylyltransferase Tax=Geobacter sp. (strain M18) RepID=E8WK28_GEOS8
molybdopterin-guanine dinucleotide biosynthesis protein A-like protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_451_12
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists


11177..13261
DNA (2085bp) protein (695aa)
arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
arginyl-tRNA synthetase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_451_13
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

13265..13954
DNA (690bp) protein (230aa)
Putative glutamine amidotransferase Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67K82_SYMTH
glutamine amidotransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_451_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(13977..15203)
DNA (1227bp) protein (409aa)
deoxyribonuclease; K00599 [EC:2.1.1.-] bin=CNBR_ACIDO species=Frankia sp. BMG5.12 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rumA; 23S rRNA (uracil-5-)-methyltransferase (EC:2.1.1.-)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_451_15
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(15301..16080)
DNA (780bp) protein (260aa)
id=12555979 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_451_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(16103..16879)
DNA (777bp) protein (259aa)
coaX; type III pantothenate kinase (Pantothenic acid kinase) (PanK-III) (EC:2.7.1.33)
Type III pantothenate kinase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKT7_9BACT
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_451_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(16928..17773)
DNA (846bp) protein (282aa)
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] bin=CNBR_ACIDO species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
biotin-(acetyl-CoA carboxylase) ligase (EC:6.3.4.15)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_451_18
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(17754..18602)
DNA (849bp) protein (283aa)
nicotinate-nucleotide pyrophosphorylase; K00767 nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] bin=CNBR_ACIDO species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_451_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


comp(18602..21181)
DNA (2580bp) protein (860aa)
tRNA synthetase valyl/leucyl anticodon-binding protein; K01873 valyl-tRNA synthetase [EC:6.1.1.9] bin=CNBR_ACIDO species=Thermomonospora curvata genus=Thermomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
valS; valyl-tRNA synthetase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_451_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(21225..22787)
DNA (1563bp) protein (521aa)
Beta-lactamase domain protein Tax=Methylobacter tundripaludum SV96 RepID=G3IXH5_9GAMM
beta-lactamase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_451_21
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

22877..23512
DNA (636bp) protein (212aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 21 items

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