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PLM3-1_170_b1_sep16_scaffold_11592

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_11592_1
CSP1_5_NC10, NC10, Bacteria

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comp(3..185)
DNA (183bp) protein (61aa)
nuoD; NADH-quinone oxidoreductase subunit D (NADH dehydrogenase I, chain D) (NDH-1, chain D) (EC:1.6.5.3 1.6.99.5) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
nuoD; NADH-quinone oxidoreductase subunit D (NADH dehydrogenase I, chain D) (NDH-1, chain D) (EC:1.6.5.3 1.6.99.5)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_11592_2
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(198..704)
DNA (507bp) protein (169aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_11592_3
CSP1_5_NC10, NC10, Bacteria

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comp(801..1160)
DNA (360bp) protein (120aa)
nuoA; NADH-quinone oxidoreductase subunit A (NADH dehydrogenase I, chain A) (NDH-1, chain A) (EC:1.6.99.5 1.6.5.3) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
nuoA; NADH-quinone oxidoreductase subunit A (NADH dehydrogenase I, chain A) (NDH-1, chain A) (EC:1.6.99.5 1.6.5.3)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_11592_4
CSP1_5_NC10, NC10, Bacteria

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comp(1271..2611)
DNA (1341bp) protein (447aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] bin=bin3_NC10 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_11592_5
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(2709..3632)
DNA (924bp) protein (308aa)
hemB; Delta-aminolevulinic acid dehydratase (porphobilinogen synthase) (EC:4.2.1.24) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hemB; Delta-aminolevulinic acid dehydratase (porphobilinogen synthase) (EC:4.2.1.24)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_11592_6
CSP1_5_NC10, NC10, Bacteria

Not on your lists

3827..5371
DNA (1545bp) protein (515aa)
two-component histidine kinase bin=bin3_NC10 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=bin3_NC10 organism_group=NC10
PAS sensor protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_11592_7
CSP1_5_NC10, NC10, Bacteria

Not on your lists

5371..6753
DNA (1383bp) protein (461aa)
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_11592_8
CSP1_5_NC10, NC10, Bacteria

Not on your lists

6931..7311
DNA (381bp) protein (127aa)
Fis family two component sigma54 specific transcriptional regulator bin=bin3_NC10 species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin3_NC10 organism_group=NC10
Fis family two component sigma54 specific transcriptional regulator
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_11592_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(7402..7518)
DNA (117bp) protein (39aa)
folC; bifunctional folylpolyglutamate synthase/dihydrofolate synthase protein FolC (EC:6.3.2.17 6.3.2.12) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
Displaying 9 items

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