ggKbase home page

PLM3-1_170_b1_sep16_scaffold_9637

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_9637_1
Neosynechococcus sphagnicola, Neosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2..406)
DNA (405bp) protein (135aa)
Methyltransferase type 12 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J4Q3_NOSP7
Methyltransferase type 12 {ECO:0000313|EMBL:KGF73250.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Neosynechococcus.;" source="Neosynechococcus sphagnicola sy1.;"
methyltransferase type 12
PLM3-1_170_b1_sep16_scaffold_9637_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(465..1112)
DNA (648bp) protein (216aa)
id=2982089 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3-1_170_b1_sep16_scaffold_9637_3
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(1264..2001)
DNA (738bp) protein (246aa)
hypothetical protein bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_9637_4
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(2012..3274)
DNA (1263bp) protein (421aa)
C4-dicarboxylate permease large subunit bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
putative C4-dicarboxylate transporter, large subunit
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_9637_5
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(3271..3777)
DNA (507bp) protein (169aa)
dctQ; TRAP dicarboxylate transporter subunit DctQ bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
dctQ; TRAP dicarboxylate transporter subunit DctQ
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_9637_6
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(3774..5585)
DNA (1812bp) protein (604aa)
periplasmic C4-dicarboxylate binding protein DctP bin=bin3_NC10 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin3_NC10 organism_group=NC10
periplasmic C4-dicarboxylate binding protein DctP
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_9637_7
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(5742..6353)
DNA (612bp) protein (204aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_9637_trna_1
unknown

Not on your lists

comp(6592..6672)
DNA (81bp)
transferRNA Leu
PLM3-1_170_b1_sep16_scaffold_9637_8
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(6846..7097)
DNA (252bp) protein (84aa)
response regulator receiver protein bin=bin3_NC10 species=Azoarcus toluclasticus genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
response regulator receiver protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_9637_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

7160..8743
DNA (1584bp) protein (528aa)
propionyl-CoA carboxylase beta chain (EC:6.4.1.3) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
propionyl-CoA carboxylase beta chain (EC:6.4.1.3)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_9637_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

8782..10284
DNA (1503bp) protein (501aa)
accC; acetyl CoA carboxylase, biotin carboxylase subunit (EC:6.3.4.14) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
accC; acetyl CoA carboxylase, biotin carboxylase subunit (EC:6.3.4.14)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_9637_11
CSP1_5_NC10, NC10, Bacteria

Not on your lists

10438..10947
DNA (510bp) protein (170aa)
biotin/lipoic acid binding domain-containing protein bin=bin3_NC10 species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
biotin/lipoic acid binding domain-containing protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_9637_12
CSP1_5_NC10, NC10, Bacteria

Not on your lists

11255..12535
DNA (1281bp) protein (427aa)
Sbm; methylmalonyl-CoA mutase, N-terminal domain/subunit bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Sbm; methylmalonyl-CoA mutase N-terminal domain-containing protein
Tax=CSP1_5_NC10
Displaying 13 items

View Taxonomy