ggKbase home page

PLM3-1_170_b1_sep16_scaffold_1407

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_1407_1
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(3..719)
DNA (717bp) protein (239aa)
pnp; Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) (EC:2.7.7.8) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
pnp; Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) (EC:2.7.7.8)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1407_2
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(843..1112)
DNA (270bp) protein (90aa)
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 bin=bin3_NC10 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
30S ribosomal protein S15
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1407_3
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(1135..2136)
DNA (1002bp) protein (334aa)
riboflavin biosynthesis protein RibF bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
riboflavin biosynthesis protein RibF
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1407_4
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(2141..3106)
DNA (966bp) protein (322aa)
truB; tRNA pseudouridine synthase B (EC:5.4.99.-) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
truB; tRNA pseudouridine synthase B (EC:5.4.99.-)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1407_5
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(3093..4091)
DNA (999bp) protein (333aa)
exopolyphosphatase-like protein; K06881 phosphoesterase RecJ domain-containing protein bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
exopolyphosphatase-like protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1407_6
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(4075..4470)
DNA (396bp) protein (132aa)
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A bin=bin3_NC10 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
rbfA; ribosome-binding factor A
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1407_7
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(4467..4769)
DNA (303bp) protein (101aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1407_8
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(4821..7343)
DNA (2523bp) protein (841aa)
infB; translation initiation factor IF-2 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
infB; translation initiation factor IF-2
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1407_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(7327..7962)
DNA (636bp) protein (212aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1407_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(7984..9315)
DNA (1332bp) protein (444aa)
nusA; transcription elongation protein nusA (N utilization substance protein A) (L factor) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
nusA; transcription elongation protein nusA (N utilization substance protein A) (L factor)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1407_11
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(9410..9877)
DNA (468bp) protein (156aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1407_12
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(10045..12132)
DNA (2088bp) protein (696aa)
fusA; elongation factor G bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
fusA; elongation factor G
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1407_13
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(12432..12668)
DNA (237bp) protein (79aa)
id=14428881 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
Displaying 13 items

View Taxonomy