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PLM3-1_170_b1_sep16_scaffold_1548

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_1548_1
CSP1_5_NC10, NC10, Bacteria

Not on your lists

51..320
DNA (270bp) protein (90aa)
Uncharacterized protein bin=bin3_NC10 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1548_2
CSP1_5_NC10, NC10, Bacteria

Not on your lists


476..3055
DNA (2580bp) protein (860aa)
leuS; leucine tRNA synthetase (EC:6.1.1.4) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
leuS; leucine tRNA synthetase (EC:6.1.1.4)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1548_3
CSP1_5_NC10, NC10, Bacteria

Not on your lists

3225..3731
DNA (507bp) protein (169aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1548_4
CSP1_5_NC10, NC10, Bacteria

Not on your lists

3870..4742
DNA (873bp) protein (291aa)
DNA polymerase III, delta subunit (EC:2.7.7.7) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
DNA polymerase III, delta subunit (EC:2.7.7.7)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1548_5
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(4751..5023)
DNA (273bp) protein (91aa)
rpsT; 30S ribosomal protein S20 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rpsT; 30S ribosomal protein S20
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1548_6
CSP1_5_NC10, NC10, Bacteria

Not on your lists

5079..6656
DNA (1578bp) protein (526aa)
mviN; virulence factor MviN-like protein; K03980 virulence factor bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
mviN; virulence factor MviN-like protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1548_7
CSP1_5_NC10, NC10, Bacteria

Not on your lists

6800..8566
DNA (1767bp) protein (589aa)
thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1548_8
CSP1_5_NC10, NC10, Bacteria

Not on your lists

8707..10434
DNA (1728bp) protein (576aa)
ilvI; acetolactate synthase large subunit (AHAS) (Acetohydroxy-acid synthase large subunit) (ALS) (EC:2.2.1.6) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ilvI; acetolactate synthase large subunit (AHAS) (Acetohydroxy-acid synthase large subunit) (ALS) (EC:2.2.1.6)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1548_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

10442..11020
DNA (579bp) protein (193aa)
ilvH; acetolactate synthase small subunit (Acetohydroxy-acid synthase small subunit) (AHAS) (ALS) (EC:2.2.1.6) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ilvH; acetolactate synthase small subunit (Acetohydroxy-acid synthase small subunit) (AHAS) (ALS) (EC:2.2.1.6)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1548_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

11041..12453
DNA (1413bp) protein (471aa)
ilvC; Ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) (EC:1.1.1.86) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ilvC; Ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) (EC:1.1.1.86)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1548_11
CSP1_5_NC10, NC10, Bacteria

Not on your lists

12468..13484
DNA (1017bp) protein (339aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1548_12
CSP1_5_NC10, NC10, Bacteria

Not on your lists

13465..14778
DNA (1314bp) protein (438aa)
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
3-phosphoshikimate 1-carboxyvinyltransferase
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1548_13
CSP1_5_NC10, NC10, Bacteria

Not on your lists

14775..15476
DNA (702bp) protein (234aa)
cmk; cytidylate kinase (CK) (Cytidine monophosphate kinase) (CMP kinase) (EC:2.7.4.14) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
cmk; cytidylate kinase (CK) (Cytidine monophosphate kinase) (CMP kinase) (EC:2.7.4.14)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1548_14
CSP1_5_NC10, NC10, Bacteria

Not on your lists

15533..16159
DNA (627bp) protein (209aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
1-acyl-sn-glycerol-3-phosphate acyltransferase
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1548_15
CSP1_5_NC10, NC10, Bacteria

Not on your lists


16202..17878
DNA (1677bp) protein (559aa)
rpsA; 30S ribosomal protein S1 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rpsA; 30S ribosomal protein S1
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1548_16
CSP1_5_NC10, NC10, Bacteria

Not on your lists

17882..18784
DNA (903bp) protein (301aa)
Signal peptide peptidase SppA, 36K type (EC:3.1.3.26) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Signal peptide peptidase SppA, 36K type (EC:3.1.3.26)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1548_17
CSP1_5_NC10, NC10, Bacteria

Not on your lists

18811..19092
DNA (282bp) protein (94aa)
ihfB; integration host factor subunit beta bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ihfB; integration host factor subunit beta
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1548_18
CSP1_5_NC10, NC10, Bacteria

Not on your lists

19150..20949
DNA (1800bp) protein (600aa)
GAF sensor-containing adenylate/guanylate cyclase bin=bin3_NC10 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
GAF sensor-containing adenylate/guanylate cyclase
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1548_19
CSP1_5_NC10, NC10, Bacteria

Not on your lists

20974..21459
DNA (486bp) protein (162aa)
histidine triad (HIT) protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Marinimicrobia tax=bin3_NC10 organism_group=NC10
histidine triad (HIT) protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1548_20
CSP1_5_NC10, NC10, Bacteria

Not on your lists

21478..21963
DNA (486bp) protein (162aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1548_21
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(22140..22835)
DNA (696bp) protein (232aa)
outer membrane assembly lipoprotein YfiO bin=bin3_NC10 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=bin3_NC10 organism_group=NC10
Tol-Pal system YbgF
Tax=CSP1_5_NC10
Displaying 21 items

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